GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004759-TA|BGIBMGA004759-PA|IPR004117|Olfactory receptor,
Drosophila
         (349 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    25   0.98 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   6.9  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   6.9  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   6.9  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 25.0 bits (52), Expect = 0.98
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 310 QISVDCFVGQRLRDANVAFETAVYNCKWEYFDKSNMKT 347
           Q+ + C  G RL + + +   A Y+C W Y      KT
Sbjct: 169 QVFMLCIFGNRLIEESSSVMEAAYSCHW-YDGSEEAKT 205


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)

Query: 152 NAFAYDLMPAFLPGRHLSEDVFVIYGFEPMFESPNFEIASTLMGVSV 198
           N  A+D+ P +LP R+ S    V   F    ES     A TL  +S+
Sbjct: 26  NKVAFDIPPDYLPDRYRSVATQVFNRFGDDTESKLPVKAITLPDLSI 72


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 220 EATMLALSDEISCVWDDACASECQQPNDFIRARLGKIV 257
           E    A  +E+  V  DA A++C++  D  R  + K++
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 220 EATMLALSDEISCVWDDACASECQQPNDFIRARLGKIV 257
           E    A  +E+  V  DA A++C++  D  R  + K++
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 220 EATMLALSDEISCVWDDACASECQQPNDFIRARLGKIV 257
           E    A  +E+  V  DA A++C++  D  R  + K++
Sbjct: 54  EGRCTAEGNELKRVLPDALATDCKKCTDKQREVIKKVI 91


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.329    0.142    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,279
Number of Sequences: 429
Number of extensions: 3273
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 5
length of query: 349
length of database: 140,377
effective HSP length: 58
effective length of query: 291
effective length of database: 115,495
effective search space: 33609045
effective search space used: 33609045
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 44 (21.8 bits)