GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004747-TA|BGIBMGA004747-PA|IPR008985|Concanavalin A-like
lectin/glucanase, IPR012680|Laminin G, subdomain 2, IPR001791|Laminin
G
         (155 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.3  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   4.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 107 HKVQVARRDEHTTLTVDGIS 126
           HK + ARRD H  L   GI+
Sbjct: 154 HKKRRARRDIHPELNTQGIA 173


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 137 AFGKFTTNSDVFVGGI 152
           AF KFT+ SDV+  GI
Sbjct: 811 AFRKFTSASDVWSMGI 826


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 97  VGNNLNDGHWHKV 109
           +G NL+  HWH V
Sbjct: 203 IGINLHHWHWHLV 215


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.135    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,691
Number of Sequences: 429
Number of extensions: 1008
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 155
length of database: 140,377
effective HSP length: 53
effective length of query: 102
effective length of database: 117,640
effective search space: 11999280
effective search space used: 11999280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)