GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004743-TA|BGIBMGA004743-PA|IPR001932|Protein phosphatase
2C-like, IPR012911|Protein serine/threonine phosphatase 2C,
C-terminal, IPR000222|Protein phosphatase 2C
         (349 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 43  QLTLNGTLSDWSYFAVFDGHAGARVSAHC 71
           QL L G L DW Y+   + HA       C
Sbjct: 115 QLYLGGDL-DWKYYTTNESHACLSTGGSC 142


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,773
Number of Sequences: 429
Number of extensions: 4223
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 1
length of query: 349
length of database: 140,377
effective HSP length: 58
effective length of query: 291
effective length of database: 115,495
effective search space: 33609045
effective search space used: 33609045
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)