GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004735-TA|BGIBMGA004735-PA|IPR000215|Proteinase
inhibitor I4, serpin
         (710 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   3.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   3.7  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 74  LYSKGETFEAITDTLGIRNSTEVKRTFQMAN 104
           ++ KGE F+A   T  I NST + +     N
Sbjct: 101 IFPKGELFDATVFTYNITNSTPLLKKLYGGN 131


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 168 FDQYGNADLVDTSVIKEGDGFVVVGSLELELDYNTGLNPTKVKTMDFYLNAKKKVKTPA 226
           FD Y    +   +++  G GF+    +EL        N  K     F +NA K++K  A
Sbjct: 498 FDTYTYDTICQLNIVHYGIGFITQSDIEL-------ANTFKAIIYGFNVNATKQIKDEA 549


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.137    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,715
Number of Sequences: 429
Number of extensions: 9686
Number of successful extensions: 35
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 2
length of query: 710
length of database: 140,377
effective HSP length: 63
effective length of query: 647
effective length of database: 113,350
effective search space: 73337450
effective search space used: 73337450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)