GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004714-TA|BGIBMGA004714-PA|IPR001128|Cytochrome P450,
IPR002403|E-class P450, group IV
         (117 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    95   2e-22
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    68   3e-14
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    38   3e-05
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   1.2  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   1.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   1.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 95.1 bits (226), Expect = 2e-22
 Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 4/112 (3%)

Query: 2   LPAGSGIVVSIWGIHRDPKYWGPEAEHFDPDRFLPERFNVEHPCCYMPFSSGPRNCLGYQ 61
           +PAG  +V+  + +HR P  + P  + FDPD FLPE+    H   ++PFS+GPR+C+G +
Sbjct: 434 IPAGCTVVIGTFKLHRQPHIY-PNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRK 492

Query: 62  YAMISMKASLSAILRRYKVVGEPEKGPVPRIRVKVDIMMKSVDGCQVALERR 113
           YAM+ +K  LS ILR ++V  + ++      R++ DI++K  DG ++ LE R
Sbjct: 493 YAMLKLKIVLSTILRNFRVRSDVKES---EFRLQADIILKRADGFKIRLEPR 541


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 67.7 bits (158), Expect = 3e-14
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 2   LPAGSGIVVSIWGIHRDPKYWGPEAEHFDPDRFLPERFNVEHPCCYMPFSSGPRNCLGYQ 61
           +P    I +  + IHRD   + P  + FDP+RF  +     HP  Y+PF  GPRNC+G +
Sbjct: 390 IPKEMKIWIPAFAIHRDSAIY-PNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGAR 448

Query: 62  YAMISMKASLSAILRRYKV 80
           +A+   K  L  ILR +KV
Sbjct: 449 FAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 37.9 bits (84), Expect = 3e-05
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 23  GPEAEHF-DPDRFLPERFNV----EHPCCYMPFSSGPRNCLGYQYAMISMKASLSAILRR 77
           G   E+F D  ++LPER+        P    PF +G R C G ++  ++++  L+ I+R 
Sbjct: 427 GLNEENFKDAKKYLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIRE 486

Query: 78  YKVVGEPE 85
           ++++ E E
Sbjct: 487 FEIIVEEE 494


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 15  IHRDPKYWGPEAEHFDPDRFLPERFNVE 42
           +   P+ W   A  +DPD+    +F  E
Sbjct: 95  VENKPELWDSLANKYDPDKKFRVKFEEE 122


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 15  IHRDPKYWGPEAEHFDPDRFLPERFNVE 42
           +   P+ W   A  +DPD+    +F  E
Sbjct: 95  VENKPELWDSLANKYDPDKKYRVKFEEE 122


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 15  IHRDPKYWGPEAEHFDPDRFLPERFNVE 42
           +   P+ W   A  +DPD+    +F  E
Sbjct: 95  VENKPELWDSLANKYDPDKKYRVKFEEE 122


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.141    0.461 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,429
Number of Sequences: 429
Number of extensions: 1739
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 117
length of database: 140,377
effective HSP length: 51
effective length of query: 66
effective length of database: 118,498
effective search space:  7820868
effective search space used:  7820868
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.0 bits)
S2: 39 (19.8 bits)