GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004700-TA|BGIBMGA004700-PA|undefined
         (91 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   4.3  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    19   7.4  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    19   7.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    19   7.4  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 56  LKQDSVQVVCLEDNEMTIKGNKSLLLKTSY 85
           LK    Q++ + D+ + IKG  SL   TSY
Sbjct: 397 LKNADSQLLVISDDNIHIKGVISLNKLTSY 426


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 10  IELSSTVQCKELKAR 24
           IE +  ++C+EL AR
Sbjct: 166 IEKNEPIECRELTAR 180


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
          determiner protein.
          Length = 400

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
          determiner protein.
          Length = 401

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 2  LRRLAAGKIELSSTVQCKELKARINHCRTRGIFVL 36
          LRR    K+   S  +  E + R N   T   F+L
Sbjct: 65 LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFIL 99


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.137    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,256
Number of Sequences: 429
Number of extensions: 897
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 91
length of database: 140,377
effective HSP length: 48
effective length of query: 43
effective length of database: 119,785
effective search space:  5150755
effective search space used:  5150755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
S2: 37 (19.0 bits)