GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004694-TA|BGIBMGA004694-PA|IPR006745|Protein of unknown
function DUF605
         (311 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   1.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   1.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.4  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 170 DQGNAGMSSGNQEAPSDPPQPTDFTSNPPETPPIAPTS 207
           D  N  MSS   ++P D    T    NP    P  P S
Sbjct: 33  DNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGPNS 70


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 170 DQGNAGMSSGNQEAPSDPPQPTDFTSNPPETPPIAPTS 207
           D  N  MSS   ++P D    T    NP    P  P S
Sbjct: 33  DNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGPNS 70


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 172 GNAGMSSGNQEAPSDPPQPTDFTSNPPETPPIAPTSFNSSLPDPNAVLRAASQLPPVP 229
           GN+G ++GN E  SD       +  PP +         S        L  A   PP P
Sbjct: 250 GNSGNAAGNNEDSSDSGAAA--SDRPPASASSNEHEAESEHTSTPNFLSEAKIFPPTP 305


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.130    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,803
Number of Sequences: 429
Number of extensions: 4980
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 311
length of database: 140,377
effective HSP length: 58
effective length of query: 253
effective length of database: 115,495
effective search space: 29220235
effective search space used: 29220235
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)