GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004690-TA|BGIBMGA004690-PA|undefined
         (607 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   3.1  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 20/80 (25%), Positives = 32/80 (40%)

Query: 64  GHYPVHETRSNLVFGFWYTLQDEVLHIIDDTKVIHPVWKEVFSRLLLALVTKSEAAPENN 123
           G+YP    R+ L F    T     LH+    ++IH +   + + + L  V  S       
Sbjct: 293 GYYPTMRFRNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVVDSYGNHVKL 352

Query: 124 LSKDDLELLRCYRQDIADTV 143
            +K  L +L    Q   D+V
Sbjct: 353 YTKQGLNVLGNIVQGNGDSV 372


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.134    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,229
Number of Sequences: 429
Number of extensions: 4342
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 1
length of query: 607
length of database: 140,377
effective HSP length: 62
effective length of query: 545
effective length of database: 113,779
effective search space: 62009555
effective search space used: 62009555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)