GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004678-TA|BGIBMGA004678-PA|IPR002401|E-class P450, group
I, IPR001128|Cytochrome P450
         (493 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   169   6e-44
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   120   3e-29
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    73   4e-15

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  169 bits (410), Expect = 6e-44
 Identities = 89/235 (37%), Positives = 136/235 (57%), Gaps = 13/235 (5%)

Query: 260 KSFLELLIESSGGNKGYTDXXXXXXXXXXXXAGTDTSAVGVAFTSVMLSRHQDVQEKVYE 319
           ++FL+LLIE+       TD             G DT+A G +F   ++  H D+QEKV +
Sbjct: 317 QAFLDLLIEAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQ 376

Query: 320 ELKEVFGDSDRPIVADDLPKLKYLEAVIKETMRLYPPVPLIVRKVDKDVTLPTG-LTLVK 378
           EL E+FGDSDRP    D  ++KYLE  + ET+R+YPPVPLI R++  D+ L +G  T+  
Sbjct: 377 ELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPA 436

Query: 379 NCGIVINIWAVHRNPLYWGDDADIFRPERFI--DTPIKHPAAFMAFSHGPRACIGYQYAT 436
            C +VI  + +HR P  +  + D+F P+ F+   T  +H  AF+ FS GPR+C+G +YA 
Sbjct: 437 GCTVVIGTFKLHRQPHIY-PNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAM 495

Query: 437 MSMKTATANLLRHFRLRPAEPTDPTYKHEKNKPLRVKFDVMMKDMDNFTVQLEPR 491
           + +K   + +LR+FR+R            K    R++ D+++K  D F ++LEPR
Sbjct: 496 LKLKIVLSTILRNFRVR---------SDVKESEFRLQADIILKRADGFKIRLEPR 541



 Score = 79.0 bits (186), Expect = 8e-17
 Identities = 50/215 (23%), Positives = 107/215 (49%), Gaps = 7/215 (3%)

Query: 19  VELRYKKKEMMKVWEQLKNDYTALPLIGHAYMFFGSQEERMKTFQRLGKESTERGGLLAL 78
           +  R  ++ ++++ E++     ALPLIG+A   FGS +     F ++ K++     ++ +
Sbjct: 28  IYFRISRRHLLELAEKIPGP-PALPLIGNALDLFGSPDAM---FSQVLKKAENFKDVVKI 83

Query: 79  WQGSRLYVMISEPVMAEYVLKT--CLEKDDILKCSRFLVGNGSVFAPVSIWRPRRKILAP 136
           W G +L + + +P   E +L +   ++K    +  +  +G+G + +    WR  RK++AP
Sbjct: 84  WVGPKLVICLIDPRDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAP 143

Query: 137 TFSPKNLTHFVDIFSKQSSYMVKYLGKAAKTGNFSIWKYINTYSMDSICETTLGVKVNAQ 196
           TF    L  F+D+F+  +  +V+ + K      F    Y++  ++D + ET +GV    +
Sbjct: 144 TFHLNVLKSFIDLFNANARSVVEKMRK-ENGKEFDCHNYMSELTVDILLETAMGVSKPTR 202

Query: 197 GNSEQPFLRAFEIICRLDSSRFCQPWLHNDTVYKM 231
            ++   +  A   +C +   R  + WL  D ++ +
Sbjct: 203 DHNAFEYAMAVMKMCDILHLRHTKIWLRPDWLFNL 237


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  120 bits (289), Expect = 3e-29
 Identities = 89/357 (24%), Positives = 156/357 (43%), Gaps = 16/357 (4%)

Query: 124 VSIWRPRRKILAPTFSPKNLTHFVDIFSKQSSYMVKYLGKAA-KTGNFSIWKYINTYSMD 182
           V  WRP R  L+P F+   L     +  + S  +  YL K   K       +    ++ D
Sbjct: 125 VERWRPLRSRLSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTD 184

Query: 183 SICETTLGVKVNAQGNSEQPFLRAFEIICRLDSSRFCQPWLHN--DTVYKMMPQYQQHKD 240
            I     G+ +++  N    F R    +  ++     +  L      +Y ++      + 
Sbjct: 185 VIGSCAFGIDMSSMTNENSEFRRMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRT 244

Query: 241 SKDFLCNFIDQAHAHRNGLK----SFLELLIESSGG-----NKGYTDXXXXXXXXXXXXA 291
              F    +     +RN        F+ +L+E         N   TD            A
Sbjct: 245 FAPFFTRVVTDTIKYRNDNNIVRPDFINMLMELQKNPQKLENIKLTDSLIAAQAFVFFLA 304

Query: 292 GTDTSAVGVAFTSVMLSRHQDVQEKVYEELKEVFGDSDRPIVADDLPKLKYLEAVIKETM 351
           G +TS+  ++     L+ +QDVQ+K+ EE+      +++ +  DD+ +++YL+ V KET+
Sbjct: 305 GFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKETL 364

Query: 352 RLYPPVPLIVRKVDKDVTL-PTGLTLVKNCGIVINIWAVHRNPLYWGDDADIFRPERFID 410
           R+YPP  +++RK   D T   T +T+ K   I I  +A+HR+   +  + D F PERF  
Sbjct: 365 RMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIY-PNPDSFDPERFDQ 423

Query: 411 TPI--KHPAAFMAFSHGPRACIGYQYATMSMKTATANLLRHFRLRPAEPTDPTYKHE 465
             +  +HP  ++ F  GPR CIG ++A    K     +LR+ ++   E T   Y+ +
Sbjct: 424 DAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKTIIPYEFD 480


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 73.3 bits (172), Expect = 4e-15
 Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 12/241 (4%)

Query: 228 VYKMMPQ--YQQHKDSKDFLCNFIDQA-----HAHRNGLKS-FLELLIESSGGNKGYTDX 279
           ++K++P   Y+Q  +S+D + N I +         R+  K   +E + +S    K     
Sbjct: 259 LWKLLPTCAYKQLIESEDAIYNIISEIIETTIQEKRDDAKDESVEAIFQSILRQKNLDIR 318

Query: 280 XXXXXXXXXXXAGTDTSAVGVAFTSVMLSRHQDVQEKVYEELKEVFGDSDRPIVADDLPK 339
                      AG  T    + F   ++ R+  VQ K+YEE   +   +   +  D+L K
Sbjct: 319 DKKAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYAL-APAGCDLTIDNLRK 377

Query: 340 LKYLEAVIKETMRLYPPVPLIVRKVDKDVTLPTGLTLVKNCGIVINIWAVHRNPLYWGDD 399
            KYL A I E++RL P    I R +D+ + L +G  L     ++++ W    N   +  D
Sbjct: 378 AKYLRACITESLRLIPTTTCIARILDEPIEL-SGYRLTAGTVVLLHTWIAGLNEENF-KD 435

Query: 400 ADIFRPERFIDTPIKH-PAAFMAFSHGPRACIGYQYATMSMKTATANLLRHFRLRPAEPT 458
           A  + PER+      H P     F  G R C G ++  ++++   A ++R F +   E  
Sbjct: 436 AKKYLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEIIVEEEL 495

Query: 459 D 459
           D
Sbjct: 496 D 496


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,822
Number of Sequences: 429
Number of extensions: 6336
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 493
length of database: 140,377
effective HSP length: 60
effective length of query: 433
effective length of database: 114,637
effective search space: 49637821
effective search space used: 49637821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)