GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004675-TA|BGIBMGA004675-PA|undefined
         (1256 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    27   0.73 
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    27   0.73 
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    27   0.73 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    27   0.73 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    27   0.96 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    27   1.3  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    26   1.7  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    26   1.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    26   1.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    26   1.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    26   1.7  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    26   1.7  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    26   2.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    26   2.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    26   2.2  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 307 ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 27.5 bits (58), Expect = 0.73
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEF--LRQNISF 737
           E+S E   +S N    NN  +N+N ++YN   +  L  NI++
Sbjct: 307 ERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 27.1 bits (57), Expect = 0.96
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 677 DNEHDKPKSIFDESIIPIAATEKSIET---STLSTNYVTKNNSEHNSNPDDYNPSEF 730
           + E+ K +    E     A  E+S E    S+LS N +  NN ++N N ++YN + +
Sbjct: 52  EREYRKYRETSKERSRDRAERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNY 108


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEF 730
           S+LS N +  NN ++N N ++YN + +
Sbjct: 82  SSLSNNTIHNNNYKYNYNNNNYNNNNY 108


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 698 EKSIETSTLSTNYVTKNNSEHNSNPDDYN 726
           E+S E   +S N    NN  +N+N ++YN
Sbjct: 74  ERSKEPKIISNNNSLSNNYNYNNNYNNYN 102


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEFLRQN 734
           S+LS N +  NN ++N N ++YN   +   N
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYNKKLYYNIN 113


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEFLRQN 734
           S+LS N +  NN ++N N ++YN   +   N
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYNKKLYYNIN 113


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEFLRQN 734
           S+LS N +  NN ++N N ++YN   +   N
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYNKKLYYNIN 113


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEFLRQN 734
           S+LS N +  NN ++N N ++YN   +   N
Sbjct: 83  SSLSNNTIHNNNYKYNYNNNNYNKKLYYNIN 113


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 15/62 (24%), Positives = 30/62 (48%)

Query: 676 QDNEHDKPKSIFDESIIPIAATEKSIETSTLSTNYVTKNNSEHNSNPDDYNPSEFLRQNI 735
           +  E  + ++  + S  P   +  S +T   + NY   N + +N N ++YN  + L  NI
Sbjct: 62  RSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNI 121

Query: 736 SF 737
           ++
Sbjct: 122 NY 123


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYNPSEFLRQN 734
           S+LS NY   N + +N+N ++YN   +   N
Sbjct: 83  SSLSNNYNYSNYNNYNNNYNNYNKKLYYNIN 113


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 704 STLSTNYVTKNNSEHNSNPDDYN 726
           S+LS NY   N + +N+N ++YN
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYN 338


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 14/60 (23%), Positives = 29/60 (48%)

Query: 1041 SENNNIANEPINLEDDQMNFDDVAILFNTDSMPTVSTESLDEEVDVFSQEVKAIDNEEIP 1100
            S+ + I    I  E + M +DD+    +T     +  E+ +EE +    ++ +ID  ++P
Sbjct: 282  SKCSMITTPEIKKEVEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLDLDSIDMMQLP 341


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.127    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,630
Number of Sequences: 429
Number of extensions: 16021
Number of successful extensions: 59
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 23
length of query: 1256
length of database: 140,377
effective HSP length: 66
effective length of query: 1190
effective length of database: 112,063
effective search space: 133354970
effective search space used: 133354970
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 49 (23.8 bits)