GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004667-TA|BGIBMGA004667-PA|undefined
         (377 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   1.1  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   5.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   7.5  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 124 RNHLRMAPHTEHTGPLSILGNFNHMFDAKTRHDAEKLYSDD 164
           RNH ++   T H   L++L +F  +F+A  R   EK+  ++
Sbjct: 135 RNHRKLIAPTFH---LNVLKSFIDLFNANARSVVEKMRKEN 172


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 135 HTGPLSILGNFNHMFDAKTRHDAEKLY 161
           +  PLS   N+N+ ++   +H+  KLY
Sbjct: 84  NNNPLSNNYNYNNNYNNYNKHNYNKLY 110


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 10/48 (20%), Positives = 24/48 (50%)

Query: 158 EKLYSDDVRMNKRLHELLKHDKFSFADQSLTSAKILSSHYFDDQNMRV 205
           ++L  DD++  + L ++ K     +   S+   K +S + F+D  + +
Sbjct: 343 KELKYDDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI 390


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,515
Number of Sequences: 429
Number of extensions: 4135
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 3
length of query: 377
length of database: 140,377
effective HSP length: 59
effective length of query: 318
effective length of database: 115,066
effective search space: 36590988
effective search space used: 36590988
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 44 (21.8 bits)