GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004663-TA|BGIBMGA004663-PA|IPR006571|TLDc,
IPR011705|BTB/Kelch-associated
         (319 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.87 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.87 
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    23   2.7  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    23   2.7  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    23   2.7  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    23   2.7  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   2.7  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 117 PMEVSLERYRRAALHAQPDHNTQPRLAVNMFAGS 150
           P +VS+ER +  ALH Q      P +      GS
Sbjct: 716 PTDVSVERNKHVALHCQAQGVPTPTIVWKKATGS 749


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 117 PMEVSLERYRRAALHAQPDHNTQPRLAVNMFAGS 150
           P +VS+ER +  ALH Q      P +      GS
Sbjct: 712 PTDVSVERNKHVALHCQAQGVPTPTIVWKKATGS 745


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLNPRFG 171


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 151 PPTPFPRFIPPNAYRFHPPLNPRFG 175


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 243 PPARHPLLKKPFALCYHPDCGPIFG 267
           PP   P    P A  +HP   P FG
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLNPRFG 180


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.134    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,525
Number of Sequences: 429
Number of extensions: 3354
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 10
length of query: 319
length of database: 140,377
effective HSP length: 58
effective length of query: 261
effective length of database: 115,495
effective search space: 30144195
effective search space used: 30144195
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)