GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004655-TA|BGIBMGA004655-PA|IPR006163|Phosphopantetheine-
binding, IPR000794|Beta-ketoacyl synthase, IPR011032|GroES-like,
IPR009081|Acyl carrier protein-like, IPR001227|Acyl transferase
region, IPR013154|Alcohol dehydrogenase GroES-like, IPR013149|Alcohol
dehydrogenase, zinc-binding, IPR002198|Short-chain
dehydrogenase/reductase SDR, IPR001031|Thioesterase
         (2129 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   5.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.6 bits (56), Expect = 2.2
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 554 LCQRRCPPDVAPACHNASDNVTISGPVASIEKFVAELTAEGIFARRVNSSGIAFHSKYIA 613
           +C R+CP    P C   + N  I      + +      +    +R +        + +I 
Sbjct: 105 VCMRKCPRRHRPVC---ASNGKIYANHCELHRAACHSGSSLTKSRLMRCLHHDIENAHIR 161

Query: 614 AAAPLLRKSLE--KVIPYPKARSSK--WVSSSLPRDQWGSELAKLSDVNYHV--NNLL 665
               + R SL+  K++ YPK+RS K   +  +L  D+   +  + S+  Y +  +NLL
Sbjct: 162 RTLHMNRTSLKTSKIVSYPKSRSRKKGGLKDNLIPDKNDPDSKECSNQEYEIMKDNLL 219


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 5.0
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 1615 LDKQTPADFQTVAKPKIDGLSGLYRSKSPASLTFPGDPAATKALDAASRELAPEL 1669
            LD + P D Q    P+ D  S    ++SP S+    DP A   + AA     P L
Sbjct: 431  LDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQV--DPMAASVVAAALTGTYPTL 483


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.135    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,311
Number of Sequences: 429
Number of extensions: 20245
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 2
length of query: 2129
length of database: 140,377
effective HSP length: 69
effective length of query: 2060
effective length of database: 110,776
effective search space: 228198560
effective search space used: 228198560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)