GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004643-TA|BGIBMGA004643-PA|undefined
         (97 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC044640-1|AAH44640.1|  579|Homo sapiens phosphatidylinositol gl...    27   9.4  
AK022830-1|BAB14263.1|  579|Homo sapiens protein ( Homo sapiens ...    27   9.4  

>BC044640-1|AAH44640.1|  579|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class Z protein.
          Length = 579

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 37  NIQQQDFA-HGAYCVQKNISSDFVVEFEIFHFRVVRLRWLAVKVSTQVASQM 87
           N+  Q+ A HG +    +++ +  + F + H + ++  W  ++V  Q ++QM
Sbjct: 300 NLNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQQLQVGLQASAQM 351


>AK022830-1|BAB14263.1|  579|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12768 fis, clone NT2RP2001576, weakly similar to
           HYPOTHETICAL 62.2 KD PROTEIN C4G8.12C IN CHROMOSOME I.
           ).
          Length = 579

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 37  NIQQQDFA-HGAYCVQKNISSDFVVEFEIFHFRVVRLRWLAVKVSTQVASQM 87
           N+  Q+ A HG +    +++ +  + F + H + ++  W  ++V  Q ++QM
Sbjct: 300 NLNPQNLARHGTHARLTHLAVNGFLLFGVLHAQALQAAWQQLQVGLQASAQM 351


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,085,553
Number of Sequences: 224733
Number of extensions: 161722
Number of successful extensions: 323
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 2
length of query: 97
length of database: 73,234,838
effective HSP length: 74
effective length of query: 23
effective length of database: 56,604,596
effective search space: 1301905708
effective search space used: 1301905708
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 57 (27.1 bits)