Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004642-TA|BGIBMGA004642-PA|undefined
(621 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015347-1|AAH15347.1| 176|Homo sapiens chromosome 19 open read... 68 9e-11
BC004533-1|AAH04533.1| 176|Homo sapiens chromosome 19 open read... 68 9e-11
BC000216-1|AAH00216.1| 176|Homo sapiens chromosome 19 open read... 68 9e-11
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-... 36 0.43
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 36 0.43
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 36 0.43
BC051729-1|AAH51729.1| 1051|Homo sapiens RICTOR protein protein. 33 3.0
AY515854-1|AAS79796.1| 1708|Homo sapiens rapamycin insensitive c... 33 3.0
AB082530-1|BAC02708.1| 1275|Homo sapiens KIAA1999 protein protein. 33 3.0
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 31 9.2
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 31 9.2
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 9.2
X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein. 31 9.2
U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subuni... 31 9.2
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 31 9.2
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 9.2
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 9.2
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 9.2
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 9.2
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 9.2
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 9.2
AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein. 31 9.2
AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial ... 31 9.2
AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subu... 31 9.2
AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein... 31 9.2
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 9.2
>BC015347-1|AAH15347.1| 176|Homo sapiens chromosome 19 open reading
frame 43 protein.
Length = 176
Score = 68.1 bits (159), Expect = 9e-11
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 558 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 614
TL F+GKRRGG LKTG+V KK K DE V + DAW+ YM EVKKY+ C ++
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169
Query: 615 KTRPLVK 621
KTRPLVK
Sbjct: 170 KTRPLVK 176
>BC004533-1|AAH04533.1| 176|Homo sapiens chromosome 19 open reading
frame 43 protein.
Length = 176
Score = 68.1 bits (159), Expect = 9e-11
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 558 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 614
TL F+GKRRGG LKTG+V KK K DE V + DAW+ YM EVKKY+ C ++
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169
Query: 615 KTRPLVK 621
KTRPLVK
Sbjct: 170 KTRPLVK 176
>BC000216-1|AAH00216.1| 176|Homo sapiens chromosome 19 open reading
frame 43 protein.
Length = 176
Score = 68.1 bits (159), Expect = 9e-11
Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 558 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 614
TL F+GKRRGG LKTG+V KK K DE V + DAW+ YM EVKKY+ C ++
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169
Query: 615 KTRPLVK 621
KTRPLVK
Sbjct: 170 KTRPLVK 176
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 493
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 494 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 527
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 493
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 494 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 527
>AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-27
protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 37 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 95
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 96 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 129
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 324 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 382
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 383 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 416
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 493
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 494 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 527
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 324 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 382
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 383 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 416
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 493
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 494 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 527
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 35.9 bits (79), Expect = 0.43
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 211 NRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQRSPK 270
+RS SRN KRSR+ S S S + E V KK++ SP
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPS 493
Query: 271 NPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDKKA 305
K+ + S + S+KR + S S + KH +++
Sbjct: 494 KEKSRKRSRSKERSHKR-DHSDSKDQSDKHDRRRS 527
>BC051729-1|AAH51729.1| 1051|Homo sapiens RICTOR protein protein.
Length = 1051
Score = 33.1 bits (72), Expect = 3.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 259 VTPPKKKQRSPKNPKNDRSSLTPPNSYKRTERSVSPCKDYKHTD 302
+T P KK RS +PK + S S +R P D+ H+D
Sbjct: 445 LTLPNKKHRSSSDPKGGKLSSESKTSNRRIRTLTEPSVDFNHSD 488
>AY515854-1|AAS79796.1| 1708|Homo sapiens rapamycin insensitive
companion of mTOR protein.
Length = 1708
Score = 33.1 bits (72), Expect = 3.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 259 VTPPKKKQRSPKNPKNDRSSLTPPNSYKRTERSVSPCKDYKHTD 302
+T P KK RS +PK + S S +R P D+ H+D
Sbjct: 1102 LTLPNKKHRSSSDPKGGKLSSESKTSNRRIRTLTEPSVDFNHSD 1145
>AB082530-1|BAC02708.1| 1275|Homo sapiens KIAA1999 protein protein.
Length = 1275
Score = 33.1 bits (72), Expect = 3.0
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 259 VTPPKKKQRSPKNPKNDRSSLTPPNSYKRTERSVSPCKDYKHTD 302
+T P KK RS +PK + S S +R P D+ H+D
Sbjct: 669 LTLPNKKHRSSSDPKGGKLSSESKTSNRRIRTLTEPSVDFNHSD 712
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 31.5 bits (68), Expect = 9.2
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
SP + S+ R+ S + + HS VSP TE + K +R
Sbjct: 1855 SPVSPSAKTERHSPASSSSKTEKHS-PVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKR 1913
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDK 303
P +P R+ PP S RTE+ + P TDK
Sbjct: 1914 PPVSPSG-RTEKHPPVSPGRTEKRL-PVSPSGRTDK 1947
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 917 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 972
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 973 TPSRRSRTPSRRSRTPSRRRRSRSV 997
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 780 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 835
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 836 TPSRRSRTPSRRSRTPSRRRRSRSV 860
>X56957-1|CAA40278.1| 634|Homo sapiens ankyrin (brank-1) protein.
Length = 634
Score = 31.5 bits (68), Expect = 9.2
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
SP + S+ R+ S + + HS VSP TE + K +R
Sbjct: 379 SPVSPSAKTERHSPASSSSKTEKHS-PVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKR 437
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSVSPCKDYKHTDK 303
P +P R+ PP S RTE+ + P TDK
Sbjct: 438 PPVSPSG-RTEKHPPVSPGRTEKRL-PVSPSGRTDK 471
>U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subunit
protein.
Length = 1112
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 454 KLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGP 499
K HR +EER K K K K PPG+ E+ + ++ G P E + P
Sbjct: 834 KKHRKEKEERTKGKKKSK--KQPPGSEEAAG-EPVQNGAPEEEQLP 876
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 232 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 287
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 288 TPSRRSRTPSRRSRTPSRRRRSRSV 312
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1884 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1939
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1940 TPSRRSRTPSRRSRTPSRRRRSRSV 1964
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1924 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1979
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1980 TPSRRSRTPSRRSRTPSRRRRSRSV 2004
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1924 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1979
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1980 TPSRRSRTPSRRSRTPSRRRRSRSV 2004
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1924 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1979
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1980 TPSRRSRTPSRRSRTPSRRRRSRSV 2004
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1924 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1979
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1980 TPSRRSRTPSRRSRTPSRRRRSRSV 2004
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1605 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1660
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1661 TPSRRSRTPSRRSRTPSRRRRSRSV 1685
>AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein.
Length = 1153
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 454 KLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGP 499
K HR +EER K K K K PPG+ E+ + ++ G P E + P
Sbjct: 875 KKHRKEKEERTKGKKKSK--KQPPGSEEAAG-EPVQNGAPEEEQLP 917
>AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial CDS
protein.
Length = 1121
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 454 KLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGP 499
K HR +EER K K K K PPG+ E+ + ++ G P E + P
Sbjct: 843 KKHRKEKEERTKGKKKSK--KQPPGSEEAAG-EPVQNGAPEEEQLP 885
>AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta
subunit, partial CDS protein.
Length = 1079
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 454 KLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGP 499
K HR +EER K K K K PPG+ E+ + ++ G P E + P
Sbjct: 801 KKHRKEKEERTKGKKKSK--KQPPGSEEAAG-EPVQNGAPEEEQLP 843
>AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein
complex 3 delta 1 subunit variant protein.
Length = 1284
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 454 KLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGP 499
K HR +EER K K K K PPG+ E+ + ++ G P E + P
Sbjct: 1006 KKHRKEKEERTKGKKKSK--KQPPGSEEAAG-EPVQNGAPEEEQLP 1048
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.5 bits (68), Expect = 9.2
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 208 SPANRSSPHSRNMSKRSRTPSNNHSVSVSPKKFTEXXXXXXXXXXXXXXXIVTPPKKKQR 267
+P+ RS H+ + +RSR+ S S+SP + + P ++ R
Sbjct: 1930 TPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRT----PSRRSR 1985
Query: 268 SPKNPKNDRSSLTPPNSYKRTERSV 292
+P S + S +R RSV
Sbjct: 1986 TPSRRSRTPSRRSRTPSRRRRSRSV 2010
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.308 0.127 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,749,107
Number of Sequences: 224733
Number of extensions: 2151321
Number of successful extensions: 6904
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6814
Number of HSP's gapped (non-prelim): 89
length of query: 621
length of database: 73,234,838
effective HSP length: 94
effective length of query: 527
effective length of database: 52,109,936
effective search space: 27461936272
effective search space used: 27461936272
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 68 (31.5 bits)
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