Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004634-TA|BGIBMGA004634-PA|IPR007087|Zinc finger,
C2H2-type
(633 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 35 0.002
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 32 0.012
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 29 0.088
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 25 1.9
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 25 1.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 24 3.3
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 35.1 bits (77), Expect = 0.002
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 366 CEICNKELCNKYFMRTHMQRMHGISLESGTQLGGVTCDICHKELCSKYFLRVHKHNTH 423
C++C K LC+K ++ H+ H E C IC + CS+ L H + H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEE------YRCVICERVYCSRNSLMTHIYTYH 59
Score = 29.9 bits (64), Expect = 0.066
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 89 CDLCCKEFCNKYFLKTHRANKH 110
C LC K C+K LK H A+KH
Sbjct: 8 CQLCGKVLCSKASLKRHVADKH 29
Score = 27.9 bits (59), Expect = 0.27
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 401 TCDICHKELCSKYFLRVHKHNTH 423
TC +C K LCSK L+ H + H
Sbjct: 7 TCQLCGKVLCSKASLKRHVADKH 29
Score = 23.8 bits (49), Expect = 4.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 176 CEICCKEYCNKYFLRTHRERRH 197
C++C K C+K L+ H +H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKH 29
Score = 23.0 bits (47), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 176 CEICCKEYCNKYFLRTH 192
C IC + YC++ L TH
Sbjct: 38 CVICERVYCSRNSLMTH 54
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 32.3 bits (70), Expect = 0.012
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 366 CEICNKELCNKYFMRTHMQRMHGISLESGTQLGGVTCDICHKELCSKYFLRVHKHNTH 423
C++C K L K ++ H ++ H L S C +CHK + L HK H
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNS------AVCALCHKVFRTLNSLNNHKSIYH 425
Score = 29.5 bits (63), Expect = 0.088
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 401 TCDICHKELCSKYFLRVHKHNTH 423
TCD+C K L +K L+ HK H
Sbjct: 373 TCDVCGKTLSTKLTLKRHKEQQH 395
Score = 28.3 bits (60), Expect = 0.20
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 176 CEICCKEYCNKYFLRTHRERRHGVPL 201
C++C K K L+ H+E++H PL
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPL 399
Score = 25.4 bits (53), Expect = 1.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 89 CDLCCKEFCNKYFLKTHRANKH 110
CD+C K K LK H+ +H
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQH 395
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 29.5 bits (63), Expect = 0.088
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 366 CEICNKELCNKYFMRTHMQRMHGISLESGTQLGGVTCDICHKELCSKYFLRVHKHNTH 423
CE CNK L + +R H+Q +H + S + C+IC + S LR HK H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVH--TRPSKEPI----CNICKRVYSSLNSLRNHKSIYH 56
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 89 CDLCCKEFCNKYFLKTHRANKHG 111
CD+C K F + LK H+ +G
Sbjct: 234 CDICGKSFGYNHVLKLHQVAHYG 256
Score = 23.8 bits (49), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 401 TCDICHKELCSKYFLRVHKHNTHG 424
TCDIC K + L++H+ +G
Sbjct: 233 TCDICGKSFGYNHVLKLHQVAHYG 256
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 176 CEICCKEYCNKYFLRTHRERRH 197
CE C + Y K L TH+ +H
Sbjct: 38 CEFCNRRYRTKNSLTTHKSLQH 59
Score = 23.0 bits (47), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 84 NPEAYCDLCCKEFCNKYFLKTHRANKH 110
N C C + F Y LK H +KH
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKH 29
Score = 23.0 bits (47), Expect = 7.6
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 366 CEICNKELCNKYFMRTHMQRMH 387
CE CN+ K + TH H
Sbjct: 38 CEFCNRRYRTKNSLTTHKSLQH 59
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 24.2 bits (50), Expect = 3.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 522 EVQIGAGEPEGGEHKAEAVDDIEGEADASYSCSRCS---FRAE 561
E IG + E G H EA +D ++ RC FRAE
Sbjct: 264 ECPIGKFKHEAGSHSCEACPAHSKSSDYGFTECRCDPGYFRAE 306
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.137 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,793
Number of Sequences: 429
Number of extensions: 4736
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 24
length of query: 633
length of database: 140,377
effective HSP length: 62
effective length of query: 571
effective length of database: 113,779
effective search space: 64967809
effective search space used: 64967809
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -