GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004632-TA|BGIBMGA004632-PA|undefined
         (69 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   1.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              19   7.3  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              18   9.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    18   9.7  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)

Query: 43  DCAMLSDADMH 53
           +C+ +SDAD+H
Sbjct: 103 ECSAISDADIH 113


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 5/11 (45%), Positives = 10/11 (90%)

Query: 43  DCAMLSDADMH 53
           +C+ +SDA++H
Sbjct: 103 ECSPISDANVH 113


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)

Query: 43  DCAMLSDADM 52
           +C+ +SDAD+
Sbjct: 103 ECSAISDADL 112


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/10 (60%), Positives = 6/10 (60%)

Query: 40   VAGDCAMLSD 49
            V GDC M  D
Sbjct: 1071 VCGDCTMAED 1080


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.128    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,672
Number of Sequences: 429
Number of extensions: 256
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 69
length of database: 140,377
effective HSP length: 45
effective length of query: 24
effective length of database: 121,072
effective search space:  2905728
effective search space used:  2905728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
S2: 35 (18.2 bits)