GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004623-TA|BGIBMGA004623-PA|IPR007114|Major facilitator
superfamily, IPR005829|Sugar transporter superfamily, IPR011701|Major
facilitator superfamily MFS_1, IPR003663|Sugar transporter
         (449 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    28   0.18 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    28   0.18 
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   4.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   5.2  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 36  ESSKGDFK-LSDHDTSWIASVVGVMGIVGNFISPVLMTKYGRQKAHLLTTIPALL-GWLI 93
           +S+  DFK L D+  +++        + GN     L++++G +KA ++TT+  LL G  +
Sbjct: 317 DSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAV 376

Query: 94  FVFGNSV 100
             +G+ +
Sbjct: 377 NYYGDEI 383


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 36  ESSKGDFK-LSDHDTSWIASVVGVMGIVGNFISPVLMTKYGRQKAHLLTTIPALL-GWLI 93
           +S+  DFK L D+  +++        + GN     L++++G +KA ++TT+  LL G  +
Sbjct: 317 DSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSLLLPGVAV 376

Query: 94  FVFGNSV 100
             +G+ +
Sbjct: 377 NYYGDEI 383


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP
          synthase 16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 13/36 (36%), Positives = 15/36 (41%)

Query: 44 LSDHDTSWIASVVGVMGIVGNFISPVLMTKYGRQKA 79
          +SD D    A   GVMG     I   L   YG  K+
Sbjct: 1  MSDEDHPIYAPFFGVMGAASAIIFSALGAAYGTAKS 36


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 422 EESFKGKKNADPEVQMTLINKTDSVL 447
           +ES   K N  P  +M  INK DS++
Sbjct: 85  DESESPKLNPYPNWEMNDINKIDSII 110


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.140    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,988
Number of Sequences: 429
Number of extensions: 4012
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 449
length of database: 140,377
effective HSP length: 60
effective length of query: 389
effective length of database: 114,637
effective search space: 44593793
effective search space used: 44593793
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 45 (22.2 bits)