GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004616-TA|BGIBMGA004616-PA|IPR010509|ABC transporter,
N-terminal, IPR003439|ABC transporter related, IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site, IPR011527|ABC transporter,
transmembrane region, type 1, IPR003593|AAA ATPase
         (754 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

 ***** No hits found ******

  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,230
Number of Sequences: 429
Number of extensions: 6643
Number of successful extensions: 8
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 0
length of query: 754
length of database: 140,377
effective HSP length: 63
effective length of query: 691
effective length of database: 113,350
effective search space: 78324850
effective search space used: 78324850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)