GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004609-TA|BGIBMGA004609-PA|undefined
         (118 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   3.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   8.7  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 39 LAVKKFADGLRNR----RLSTIISARDYSDFKDAVRAAEDEE 76
          L +++F  GLR      R+ T I  +   DF+D     EDE+
Sbjct: 17 LTLEEFQIGLRAVVPICRIETSIDQQKEDDFRDGNIDVEDEK 58


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 91  TLEHQCSINRQIATYGRHVPIIN 113
           T EH C +     ++GR + + N
Sbjct: 537 TQEHVCGVKGIPCSWGRAINVAN 559


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,841
Number of Sequences: 429
Number of extensions: 1350
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 118
length of database: 140,377
effective HSP length: 51
effective length of query: 67
effective length of database: 118,498
effective search space:  7939366
effective search space used:  7939366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)