GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004591-TA|BGIBMGA004591-PA|undefined
         (151 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.        29   6.5  
BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.        29   6.5  
BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.        29   6.5  
AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.       29   6.5  
AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.        29   6.5  

>BC104485-1|AAI04486.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 9  DEGYHGLIKENETLVEVTPPIRARG-----PLCSFLILNNIHHGEAPFE 52
          +  YHG+I EN   V + PP+ A       P    +    IH  E PFE
Sbjct: 45 ETSYHGVITENNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFE 93


>BC103506-1|AAI03507.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 9  DEGYHGLIKENETLVEVTPPIRARG-----PLCSFLILNNIHHGEAPFE 52
          +  YHG+I EN   V + PP+ A       P    +    IH  E PFE
Sbjct: 45 ETSYHGVITENNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFE 93


>BC103496-1|AAI03497.1|  955|Homo sapiens calsyntenin 2 protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 9  DEGYHGLIKENETLVEVTPPIRARG-----PLCSFLILNNIHHGEAPFE 52
          +  YHG+I EN   V + PP+ A       P    +    IH  E PFE
Sbjct: 45 ETSYHGVITENNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFE 93


>AY753303-1|AAV30553.1|  955|Homo sapiens alcadein gamma protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 9  DEGYHGLIKENETLVEVTPPIRARG-----PLCSFLILNNIHHGEAPFE 52
          +  YHG+I EN   V + PP+ A       P    +    IH  E PFE
Sbjct: 45 ETSYHGVITENNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFE 93


>AJ278018-1|CAC14924.1|  955|Homo sapiens calsyntenin-2 protein.
          Length = 955

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 9  DEGYHGLIKENETLVEVTPPIRARG-----PLCSFLILNNIHHGEAPFE 52
          +  YHG+I EN   V + PP+ A       P    +    IH  E PFE
Sbjct: 45 ETSYHGVITENNDTVILDPPLVALDKDAPVPFAGEICAFKIHGQELPFE 93


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,671,595
Number of Sequences: 224733
Number of extensions: 887471
Number of successful extensions: 1449
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1449
Number of HSP's gapped (non-prelim): 5
length of query: 151
length of database: 73,234,838
effective HSP length: 84
effective length of query: 67
effective length of database: 54,357,266
effective search space: 3641936822
effective search space used: 3641936822
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)