GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004591-TA|BGIBMGA004591-PA|undefined
         (151 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p pro...    49   3e-06
AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-...    49   3e-06
AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB...    49   3e-06
AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA...    49   3e-06

>AY121644-1|AAM51971.1|  978|Drosophila melanogaster LD11689p
          protein.
          Length = 978

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 9  DEGYHGLIKENETLVEVTPPIRA-RGPLCSFLILNNIHHGEAPFEDE 54
          ++ YHGLI+ENETLVE+TP I+     +C+F IL   +H E PF+ E
Sbjct: 43 EKSYHGLIRENETLVEITPLIKVNEEKICNFHILKKPYH-EIPFKIE 88


>AJ289018-1|CAC17749.1|  978|Drosophila melanogaster calsyntenin-1
          protein protein.
          Length = 978

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 9  DEGYHGLIKENETLVEVTPPIRA-RGPLCSFLILNNIHHGEAPFEDE 54
          ++ YHGLI+ENETLVE+TP I+     +C+F IL   +H E PF+ E
Sbjct: 43 EKSYHGLIRENETLVEITPLIKVNEEKICNFHILKKPYH-EIPFKIE 88


>AE014135-195|AAN06580.1|  978|Drosophila melanogaster CG11059-PB,
          isoform B protein.
          Length = 978

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 9  DEGYHGLIKENETLVEVTPPIRA-RGPLCSFLILNNIHHGEAPFEDE 54
          ++ YHGLI+ENETLVE+TP I+     +C+F IL   +H E PF+ E
Sbjct: 43 EKSYHGLIRENETLVEITPLIKVNEEKICNFHILKKPYH-EIPFKIE 88


>AE014135-194|AAF59384.2|  978|Drosophila melanogaster CG11059-PA,
          isoform A protein.
          Length = 978

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 9  DEGYHGLIKENETLVEVTPPIRA-RGPLCSFLILNNIHHGEAPFEDE 54
          ++ YHGLI+ENETLVE+TP I+     +C+F IL   +H E PF+ E
Sbjct: 43 EKSYHGLIRENETLVEITPLIKVNEEKICNFHILKKPYH-EIPFKIE 88


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,561,745
Number of Sequences: 52641
Number of extensions: 288188
Number of successful extensions: 370
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 366
Number of HSP's gapped (non-prelim): 4
length of query: 151
length of database: 24,830,863
effective HSP length: 79
effective length of query: 72
effective length of database: 20,672,224
effective search space: 1488400128
effective search space used: 1488400128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)