GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004591-TA|BGIBMGA004591-PA|undefined
         (151 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   2.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   9.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   9.5  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 9   DEGYHGLIKENETLVEVTP 27
           D+G  G+ K  + LVE  P
Sbjct: 192 DDGTEGIAKSGDVLVETEP 210


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 96  ICAAAEYTTREQGGVDHGLFYSSWPRGLRYVYVAVIEVE 134
           +C+  +         D G+FY ++   + ++  A  EV+
Sbjct: 351 VCSKLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVK 389


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 42  NNIHHGEAPFEDEQALGRCTLGVGNNLLVRGEKEE 76
           N +H   +P ED        L  GN+    G  E+
Sbjct: 227 NGVHEENSPLEDNIKCEPLELTGGNSGNAAGNNED 261


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 96  ICAAAEYTTREQGGVDHGLFYSSWPRGLRYVYVAVIEVE 134
           +C+  +         D G+FY ++   + ++  A  EV+
Sbjct: 441 VCSKLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVK 479


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.140    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,547
Number of Sequences: 429
Number of extensions: 1496
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 151
length of database: 140,377
effective HSP length: 53
effective length of query: 98
effective length of database: 117,640
effective search space: 11528720
effective search space used: 11528720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)