GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004579-TA|BGIBMGA004579-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR001849|Pleckstrin-like,
IPR010439|Protein of unknown function DUF1041, IPR008973|C2
calcium/lipid-binding region, CaLB
         (1115 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   1.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    26   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   1.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   3.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   4.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   4.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   6.0  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   7.9  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 595 RVLMKDVVTPVAPEEVRTMIQTSLE--NAALLNYTQLSQKANIEEDLRGDTMVTPAKKLE 652
           R+LM D++ P  PE    +    +E  N    N  +  QK    + +   T+V+   +L+
Sbjct: 274 RLLMNDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQ 333

Query: 653 DLI 655
           DL+
Sbjct: 334 DLL 336


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 595 RVLMKDVVTPVAPEEVRTMIQTSLE--NAALLNYTQLSQKANIEEDLRGDTMVTPAKKLE 652
           R+LM D++ P  PE    +    +E  N    N  +  QK    + +   T+V+   +L+
Sbjct: 189 RLLMNDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQ 248

Query: 653 DLI 655
           DL+
Sbjct: 249 DLL 251


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 595 RVLMKDVVTPVAPEEVRTMIQTSLE--NAALLNYTQLSQKANIEEDLRGDTMVTPAKKLE 652
           R+LM D++ P  PE    +    +E  N    N  +  QK    + +   T+V+   +L+
Sbjct: 508 RLLMNDILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQ 567

Query: 653 DLI 655
           DL+
Sbjct: 568 DLL 570


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)

Query: 979  QWYGNQVTMINNW---LSERPALHP 1000
            QW GN ++ +N+W    S  PAL P
Sbjct: 421  QWQGNPISPLNDWYSLASSWPALVP 445


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 388 ALYRATGQSHKPTPPTTSDTHHKIMG 413
           +++ + GQ+H    PT   TH K+ G
Sbjct: 369 SVHYSNGQTHSQLCPTPRSTHLKVSG 394


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
            alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 981  YGNQVTMINNWLSERPALHPHQVACLSILLKKMYSDFELQ 1020
            +G+ VT+ N + S    L  H      ILLK   S F+L+
Sbjct: 607  FGHNVTLANKFESLSEPLRIHVSPTTYILLKYPISGFDLE 646


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 529 DVVHSTATLPGRPDGVGSITVQEKEKFAEIKERLKTLLQH 568
           D+++    +P R  G GS  + E+E+   +  ++  + +H
Sbjct: 153 DIINPEDVIPIRRTGEGSKPIFEREEIKNVLTKINKIEEH 192


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 360 KYFMNAVRDGESVLMGTTDENE 381
           K F NA+R G+S+ M  T  N+
Sbjct: 20  KDFQNAIRMGQSICMAKTGINK 41


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,958
Number of Sequences: 429
Number of extensions: 13323
Number of successful extensions: 43
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 34
Number of HSP's gapped (non-prelim): 12
length of query: 1115
length of database: 140,377
effective HSP length: 65
effective length of query: 1050
effective length of database: 112,492
effective search space: 118116600
effective search space used: 118116600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)