GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004575-TA|BGIBMGA004575-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   0.34 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   4.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   4.2  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          19   7.3  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 0.34
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 6   VDLIFGGSLKSLPPVSSKIVRIFTSSTFTDT 36
           +D +F  +L+  PP S  + +  +  TF DT
Sbjct: 356 LDKVFKETLRMYPPASILMRKAISDYTFNDT 386


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 6/25 (24%), Positives = 16/25 (64%)

Query: 50 RIKDYCREKHGLEFQTSFTLVSGMF 74
          +I+  C E++G++ + +  +  G+F
Sbjct: 28 KIESVCAEENGIDLKKADDVKKGIF 52


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)

Query: 66  SFTLVSGMFG 75
           SFTL SG+FG
Sbjct: 244 SFTLQSGIFG 253


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 6/10 (60%), Positives = 9/10 (90%)

Query: 10 FGGSLKSLPP 19
          FGGS+ ++PP
Sbjct: 88 FGGSIITIPP 97


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.136    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,890
Number of Sequences: 429
Number of extensions: 933
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)