GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004572-TA|BGIBMGA004572-PA|undefined
         (91 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   0.086
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   0.086
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   1.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   3.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   4.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   5.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.8 bits (54), Expect = 0.086
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 33  MIEASERNDKRNIFYWMEDHGWSRDL 58
           ++EA+ R++    F W+   GW R +
Sbjct: 212 ILEAARRSNLSQPFQWLASDGWGRQI 237


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.8 bits (54), Expect = 0.086
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 33  MIEASERNDKRNIFYWMEDHGWSRDL 58
           ++EA+ R++    F W+   GW R +
Sbjct: 302 ILEAARRSNLSQPFQWLASDGWGRQI 327


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 8/29 (27%), Positives = 17/29 (58%)

Query: 60  DWLGQMSGMKDLAKRTCLASANGLTSGSE 88
           ++L ++ G+ D    TC   A+ +++G E
Sbjct: 579 EFLPKLKGIPDPXPNTCKVIASSVSAGEE 607


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 64  QMSGMKDLAKRTCLASANGLT 84
           QMSG K   K+  L  A GL+
Sbjct: 86  QMSGAKQKKKKRSLMGAQGLS 106


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
          protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 42 KRNIFYWMEDHGWSRDLVDWLGQMSGMKD 70
          K  IFY +    +     D +G + G+KD
Sbjct: 26 KNAIFYQVYPRSFMDSNSDGIGDLKGIKD 54


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 33  MIEASERNDKRNIFYWMEDHGWS-RDLV 59
           ++ A +R +    F W+   GWS R LV
Sbjct: 357 VMRAVKRCNATGAFSWIGSDGWSARGLV 384


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 1   MNEIDQGSTGFLNPKYVWRK-LNKGILSICDLIMIEASERNDKRNIFYWMEDHGWSRDLV 59
           +N + QG+    + +   RK + K + ++  L  I  +  + +R ++ + ++  +  DL 
Sbjct: 247 LNSVVQGAIHGDSRQIQSRKSVIKMLSAVVILFFICWAPFHTQRLLYVYAQESDYYPDLN 306

Query: 60  DWLGQMSG 67
           +WL  +SG
Sbjct: 307 EWLYILSG 314


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,686
Number of Sequences: 429
Number of extensions: 909
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 91
length of database: 140,377
effective HSP length: 48
effective length of query: 43
effective length of database: 119,785
effective search space:  5150755
effective search space used:  5150755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)