Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004571-TA|BGIBMGA004571-PA|IPR000152|Aspartic acid and
asparagine hydroxylation site, IPR001638|Bacterial extracellular
solute-binding protein, family 3, IPR013032|EGF-like region,
IPR001881|EGF-like calcium-binding, IPR006209|EGF-like, IPR013091|EGF
calcium-binding, IPR000742|EGF-like, type 3, IPR009030|Growth factor,
receptor, IPR002919|Protease inhibitor I8, cysteine-rich trypsin
inhibitor-like, IPR006210|EGF
(1150 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 34 0.006
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 29 0.16
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 28 0.38
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 25 2.7
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 25 2.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 8.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 8.2
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 34.3 bits (75), Expect = 0.006
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 401 CHCKVGYELDVTTSACIDMNECATGQHNCIIGSQRCD 437
CHCK GY+ DV C EC G+ GS C+
Sbjct: 247 CHCKPGYQADVEKQEC---TECPIGKFKHEAGSHSCE 280
Score = 26.6 bits (56), Expect = 1.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 79 PTELCAHHCIPVPGSYKCECNPGFMLMADGRNCKEV----IKNRCRPRN----PCQHKCN 130
PT LC S C C PG+ + + C E K+ + P K +
Sbjct: 230 PTFLCKGDGKWYLPSGGCHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSKSS 289
Query: 131 DNGITVKCSCRRGY 144
D G T +C C GY
Sbjct: 290 DYGFT-ECRCDPGY 302
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 29.5 bits (63), Expect = 0.16
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 83 CAHHCIPVPGS------YKCECNPGFMLMADGRNCKEVIKNRCRP 121
C+H C+P P C C G L++DG C E + P
Sbjct: 43 CSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTIVP 87
Score = 26.6 bits (56), Expect = 1.2
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 117 NRCRPRNP-CQHKC------NDNGITVKCSCRRGYELMPDGKSC 153
N+C+ N C H C N + C+C G +L+ DG C
Sbjct: 34 NQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMC 77
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 28.3 bits (60), Expect = 0.38
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Query: 83 CAHHCIPVPGS------YKCECNPGFMLMADGRNCKE 113
C+H C+P P C C G L++DG C E
Sbjct: 43 CSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVE 79
Score = 27.9 bits (59), Expect = 0.50
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 117 NRCRPRNP-CQHKC------NDNGITVKCSCRRGYELMPDGKSCKDID 157
N+C+ N C H C N + C+C G +L+ DG C + D
Sbjct: 34 NQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKD 81
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 25.4 bits (53), Expect = 2.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 14/58 (24%)
Query: 68 GKIASLCEDYAPTELCAHHCIPVPGSYKCECNPGFMLMADGRNCKEVIKNRCRPRNPC 125
G+ C + P LC C P C C G++ RN K+V C PR+ C
Sbjct: 48 GRCQRFCPNVVPKPLCIKICAP-----GCVCRLGYL-----RNKKKV----CVPRSKC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 25.4 bits (53), Expect = 2.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 14/58 (24%)
Query: 68 GKIASLCEDYAPTELCAHHCIPVPGSYKCECNPGFMLMADGRNCKEVIKNRCRPRNPC 125
G+ C + P LC C P C C G++ RN K+V C PR+ C
Sbjct: 48 GRCQRFCPNVVPKPLCIKICAP-----GCVCRLGYL-----RNKKKV----CVPRSKC 91
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.8 bits (49), Expect = 8.2
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 683 SEPKTDISSTTTTHEYITDSEPKSN 707
+EP +D STT+ +TD+E KSN
Sbjct: 353 AEPSSDAVSTTSGTTTVTDNE-KSN 376
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 8.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 881 NTQGGYKCECPPNWSLDDVRHRCVPIRRHGLFPPGYGNEPPHDSRPVVS 929
N YK P +++++ + VP+ FP YGN PP P VS
Sbjct: 326 NYNNNYK---PLHYNINYIEQIPVPVP----FPVYYGNFPPRPMGPFVS 367
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.138 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,673
Number of Sequences: 429
Number of extensions: 18221
Number of successful extensions: 51
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 13
length of query: 1150
length of database: 140,377
effective HSP length: 65
effective length of query: 1085
effective length of database: 112,492
effective search space: 122053820
effective search space used: 122053820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
- SilkBase 1999-2023 -