Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004568-TA|BGIBMGA004568-PA|undefined
(974 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 27 0.56
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 26 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 2.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 3.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 5.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 6.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 6.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 6.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 6.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 6.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 6.9
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 27.5 bits (58), Expect = 0.56
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 496 PQESNDGPILWIRPGEQLV 514
P E +DGP WI PG+ V
Sbjct: 71 PXEEDDGPYKWISPGDTKV 89
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 26.2 bits (55), Expect = 1.3
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 850 KIDKDLKTEKPEKLDKTDRSDKTERTE 876
+ DK + ++ +K+D+ DR D+T R +
Sbjct: 506 RTDKMSRIDRMDKIDRMDRMDRTNRMD 532
Score = 25.0 bits (52), Expect = 3.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 851 IDKDLKTEKPEKLDKTDRSDKTERT 875
+D+ K + +++DK DR D+ +RT
Sbjct: 504 MDRTDKMSRIDRMDKIDRMDRMDRT 528
Score = 24.2 bits (50), Expect = 5.2
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 850 KIDKDLKTEKPEKLDKTDRSDKTERTE 876
+ DK ++ +++D+ DR D +RT+
Sbjct: 434 RTDKMSSMDRMDRMDRVDRMDTMDRTD 460
Score = 24.2 bits (50), Expect = 5.2
Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 838 ERLDIKSSKSE-GKIDKDLKTEKPEKLDKTDRSDKTER 874
+R+D + +ID+ K ++ +++D+T+R D+ R
Sbjct: 499 DRMDTMDRTDKMSRIDRMDKIDRMDRMDRTNRMDRMNR 536
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 2.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTER 874
KS K+E K +T K DKT+R ER
Sbjct: 286 KSYKNENSYRKYRETSKERSRDKTERERSKER 317
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 840 LDIKSSKSEGKIDKDLKTEKPEKLDKTD 867
LD+ + K+ GK D++ + E LDK D
Sbjct: 1369 LDVSNPKNAGKKKIDVRAKLNEYLDKAD 1396
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTER 874
KS K+E K +T K D+T+R ER
Sbjct: 281 KSYKNENSYRKYRETSKERSRDRTERERSKER 312
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 843 KSSKSEGKIDKDLKTEKPEKLDKTDRSDKTE 873
KS K+E K KT K D+T+R E
Sbjct: 48 KSYKNENSYRKYRKTSKERSRDRTERERSKE 78
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.133 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,030
Number of Sequences: 429
Number of extensions: 8880
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 15
length of query: 974
length of database: 140,377
effective HSP length: 64
effective length of query: 910
effective length of database: 112,921
effective search space: 102758110
effective search space used: 102758110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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