GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004531-TA|BGIBMGA004531-PA|IPR001757|ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
         (63 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    19   3.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   6.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    18   8.1  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query: 48  TSPTDEVVVGAS 59
           +SP D+V++G S
Sbjct: 257 SSPHDQVIIGGS 268


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 8   PAQYGVSLRQLRELME 23
           P  YGV    LRE+ +
Sbjct: 929 PIHYGVCSNYLREISD 944


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 9   AQYGVSLRQLRELMETRGAEGMAKINALGG 38
           ++YG +  Q + + +    E +AKI +  G
Sbjct: 287 SEYGANNVQYQGVQDIFNTESIAKIMSKNG 316


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.130    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,893
Number of Sequences: 429
Number of extensions: 418
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 63
length of database: 140,377
effective HSP length: 43
effective length of query: 20
effective length of database: 121,930
effective search space:  2438600
effective search space used:  2438600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.7 bits)
S2: 35 (18.2 bits)