GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004518-TA|BGIBMGA004518-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
         (302 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    75   6e-16
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   1.1  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 75.4 bits (177), Expect = 6e-16
 Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 30/228 (13%)

Query: 76  CGGTLISNTWVLTAAHCAEDPHEGPASVLRVGTATFEFDEVDELAQERTVLKVISHPQYE 135
           CG T+IS  +VLTAAHC  D +    +++ VG   +            ++ KVI HP+Y+
Sbjct: 188 CGATIISKRYVLTAAHCIIDENTTKLAIV-VGEHDWSSKTETNATVLHSINKVIIHPKYD 246

Query: 136 PPSK----YNDIALMKANPPFLLTRDIRIACLPSD---DKENYKSLTATGFGVTYSGAMK 188
              K     NDIAL+K          +  ACLP     D      +T  G+G T    M 
Sbjct: 247 IIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGML 306

Query: 189 GSETLMSVDVSIVNRSFCNQSMKYLIKRKILARGIIETQLCAGDFEHGGKDTCQGDSGGP 248
            S  L    ++++ +  C    KY          I+   +CA      GKD CQ DSGGP
Sbjct: 307 -SHILQKTTLNMLTQVEC---YKYY-------GNIMVNAMCA---YAKGKDACQMDSGGP 352

Query: 249 LQVMEDGVDCIHTFPLHTVVGVTSFGRDCGRKLSPGIYTKVSEYVEWI 296
           +         +        +G+ S+G +CG+   P   TKV  Y++WI
Sbjct: 353 VLWQNPRTKRL------VNIGIISWGAECGK--YPNGNTKVGSYIDWI 392


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 173 SLTATGFGVTYSGAMKGSETLMSVDVSIVNRSFCNQS-MKYLIKRK 217
           +LT  G GV Y+G   G E         V+ + CN    KY +K +
Sbjct: 374 TLTLPGIGVVYNGDEIGMEDRWFTYQETVDPAGCNAGPAKYYLKSR 419


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 133 QYEPPSKYNDIALMKANPPFLLTRDIRIAC 162
           Q E  +   D  LM +N P L  R  R+ C
Sbjct: 35  QIEEENIEPDTELMDSNEPLLPLRHRRVTC 64


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,281
Number of Sequences: 429
Number of extensions: 3751
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 302
length of database: 140,377
effective HSP length: 57
effective length of query: 245
effective length of database: 115,924
effective search space: 28401380
effective search space used: 28401380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)