GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004512-TA|BGIBMGA004512-PA|undefined
         (118 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   0.70 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.0  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   6.6  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
          protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 46 DEDGDAQGELGGMGARI 62
          D DGD  G+L G+ AR+
Sbjct: 42 DSDGDGIGDLNGITARM 58


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 11  NVRHKDASAQYAANSAEGVCGIASVG 36
           N  H+D +A+    +A  VC IA  G
Sbjct: 755 NYVHRDLAARNVLVNAALVCKIADFG 780


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
          protein protein.
          Length = 166

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 14 HKDASAQYAANS 25
          H D+  +YAANS
Sbjct: 78 HDDSDEEYAANS 89


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,308
Number of Sequences: 429
Number of extensions: 810
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 118
length of database: 140,377
effective HSP length: 51
effective length of query: 67
effective length of database: 118,498
effective search space:  7939366
effective search space used:  7939366
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)