Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004500-TA|BGIBMGA004500-PA|IPR001607|Zinc finger,
UBP-type, IPR001394|Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2, IPR006615|Ubiquitin carboxyl-terminal hydrolase,
N-terminal region 1
(946 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 26 1.7
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 25 2.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 25 2.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 25 2.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 25 2.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 2.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 2.9
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 25 2.9
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 25 2.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 25 2.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 3.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 6.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 8.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 8.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 8.8
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 40 LWICLQPEC--HHVGCSEVKNDHSTFHHKQSPDSTTADGSVRIGSV 83
L + ++PEC C+ + + K P+STT +GS G +
Sbjct: 248 LTVGMRPECVVPEYQCAVKRKEEKAQKEKDKPNSTTMNGSPGSGGI 293
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 25.0 bits (52), Expect = 2.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 829 SESDKEDYCSKSTSEADI-RDSIQAAELQKNQS-LQNINGRKISRASGDSDDDVT 881
S+SD E Y + S+ D+ R S++ +EL +S +G K + D DD T
Sbjct: 172 SDSDVESY-KQIKSDLDVLRQSVEKSELWVYKSKASEEHGNKKKKNKEDEDDGAT 225
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 2.9
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNINGRK 868
S S + + + N R RKY E+ KE + E I + L N + N N +K
Sbjct: 40 SRSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKI-ISSLSNNYNYNNNNYKK 98
Query: 869 I 869
+
Sbjct: 99 L 99
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 2.9
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNINGRK 868
S S + + + N R RKY E+ KE + E I + L N + N N +K
Sbjct: 40 SRSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKI-ISSLSNNYNYNNNNYKK 98
Query: 869 I 869
+
Sbjct: 99 L 99
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.0 bits (52), Expect = 2.9
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNINGRK 868
S S + + + N R RKY E+ KE + E I + L N + N N +K
Sbjct: 40 SRSREREQNSYKNEREYRKYRETSKERSRDRKEREKSKEHKI-ISSLSNNYNYNNNNYKK 98
Query: 869 I 869
+
Sbjct: 99 L 99
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 2.9
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSK----STSEADIRDSIQAAELQKNQSLQNI 864
S S + + + N R RKY E+ KE + + + E+ I S+ + N + +N
Sbjct: 273 SRSREREQKSYKNEREYRKYRETSKERFRDRRERERSKESKIISSLSNKTIHNNNNYKNY 332
Query: 865 N 865
N
Sbjct: 333 N 333
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.0 bits (52), Expect = 2.9
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNINGRK 868
S S + + + N R RKY E+ KE ++ E I + L N N N
Sbjct: 273 SRSREREQKSYKNEREYRKYGETSKERSRDRTERERSKEPKI-ISSLSNNYKYSNYNNYN 331
Query: 869 ISRAS-GDSDDDVTYQYKRHEPNGNYGDSGDEPASKP 904
+ + + +++ YK+ N NY + P P
Sbjct: 332 NNYNNYNNYNNNYNNNYKKLYYNINYIEQIPVPVPVP 368
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 25.0 bits (52), Expect = 2.9
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 149 DKKPGISRAYQKLIQEMWSRKSRGYVVPNGILYGIRNVHPMFRGYHQHDTQEFLRCFMDQ 208
D+ G++ +KL+Q W+ V + + GI + F+ Y ++ Q + FMD
Sbjct: 19 DQATGLTERQKKLVQNTWA-----VVRKDEVASGIAVMTAFFKKYPEY--QRYFTAFMDT 71
Query: 209 LHEEL 213
EL
Sbjct: 72 PLNEL 76
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 25.0 bits (52), Expect = 2.9
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 149 DKKPGISRAYQKLIQEMWSRKSRGYVVPNGILYGIRNVHPMFRGYHQHDTQEFLRCFMDQ 208
D+ G++ +KL+Q W+ V + + GI + F+ Y ++ Q + FMD
Sbjct: 19 DQATGLTERQKKLVQNTWA-----VVRKDEVASGIAVMTAFFKKYPEY--QRYFTAFMDT 71
Query: 209 LHEEL 213
EL
Sbjct: 72 PLNEL 76
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 25.0 bits (52), Expect = 2.9
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 267 PASYNDSAADGYYRIHNQETAGTRH--KRSASFAGMH--QFTYNAHTQQLNGPTSNQ 319
P S G Y + N +++G H + SAS + H +F+ + H L+ P ++
Sbjct: 9 PVSLQTQRIQGLYLLDNNDSSGIPHSAESSASNSPDHYERFSPSTHLMDLSSPPEHR 65
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 24.6 bits (51), Expect = 3.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 214 KEPIYNCTPNDKLDSEADGDHHGNR 238
K Y+ P ++D + G HHG R
Sbjct: 363 KRSDYDSRPQYQIDKRSMGSHHGQR 387
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 6.7
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNIN 865
S S + + + N R RKY E+ KE ++ E R+ + L N + N N
Sbjct: 40 SRSREREQNSYKNEREYRKYRETSKERSRDRTERERS-REPKIISSLSNNYNYSNYN 95
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 8.8
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNIN 865
S S + + + N R RKY E+ KE ++ E I + L N N N
Sbjct: 40 SRSREREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKI-ISSLSNNYKYSNYN 95
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 8.8
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNIN 865
S S + + + N R RKY E+ KE ++ E I + L N N N
Sbjct: 40 SRSREREQKSYKNEREYRKYRETSKERSQDRTERETSKEPKI-ISSLSNNYKYSNYN 95
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 8.8
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 809 SHSCHQIETTLDNRRLSRKYSESDKEDYCSKSTSEADIRDSIQAAELQKNQSLQNIN 865
S S + + + N R RKY E+ KE + E I + L N + N N
Sbjct: 40 SRSREREQNSYKNEREYRKYRETSKERSRDRRERERSKEPKI-VSSLSNNYNYSNYN 95
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.133 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,606
Number of Sequences: 429
Number of extensions: 11355
Number of successful extensions: 82
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 80
Number of HSP's gapped (non-prelim): 17
length of query: 946
length of database: 140,377
effective HSP length: 64
effective length of query: 882
effective length of database: 112,921
effective search space: 99596322
effective search space used: 99596322
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)
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