GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004485-TA|BGIBMGA004485-PA|undefined
         (68 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM079969-1|CAL04115.1|   99|Homo sapiens immunoglobulin heavy ch...    31   0.77 
D26361-1|BAA05392.2| 1652|Homo sapiens KIAA0042 protein.               27   9.5  
BC113742-1|AAI13743.1| 1648|Homo sapiens kinesin family member 1...    27   9.5  
AL445483-1|CAI17049.1| 1648|Homo sapiens kinesin family member 1...    27   9.5  

>AM079969-1|CAL04115.1|   99|Homo sapiens immunoglobulin heavy
          chain variable region protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query: 7  VKWISKINDGGISTQFFMAMMADARVNERPSAAFVLHAHRRSADTAL 53
          ++W+S INDGG +T +  ++     ++   S  ++     R+ DTA+
Sbjct: 48 LEWVSSINDGGYNTYYTESVKGRFTISRDYSTVYLQMNSLRAEDTAV 94


>D26361-1|BAA05392.2| 1652|Homo sapiens KIAA0042 protein.
          Length = 1652

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 27  MADARVNERPSAAFVLHAHRRSAD-TALPE 55
           M++ +V +RP ++F+ +   RSA+ T LPE
Sbjct: 312 MSNLQVKQRPKSSFLANKQERSAENTILPE 341


>BC113742-1|AAI13743.1| 1648|Homo sapiens kinesin family member 14
           protein.
          Length = 1648

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 27  MADARVNERPSAAFVLHAHRRSAD-TALPE 55
           M++ +V +RP ++F+ +   RSA+ T LPE
Sbjct: 308 MSNLQVKQRPKSSFLANKQERSAENTILPE 337


>AL445483-1|CAI17049.1| 1648|Homo sapiens kinesin family member 14
           protein.
          Length = 1648

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)

Query: 27  MADARVNERPSAAFVLHAHRRSAD-TALPE 55
           M++ +V +RP ++F+ +   RSA+ T LPE
Sbjct: 308 MSNLQVKQRPKSSFLANKQERSAENTILPE 337


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,668,670
Number of Sequences: 224733
Number of extensions: 262863
Number of successful extensions: 935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 934
Number of HSP's gapped (non-prelim): 4
length of query: 68
length of database: 73,234,838
effective HSP length: 47
effective length of query: 21
effective length of database: 62,672,387
effective search space: 1316120127
effective search space used: 1316120127
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)