BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004476-TA|BGIBMGA004476-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
(306 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC058007-1|AAH58007.1| 334|Homo sapiens mucin 15, cell surface ... 35 0.31
BC020912-1|AAH20912.2| 336|Homo sapiens mucin 15, cell surface ... 35 0.31
AJ417818-1|CAD10624.1| 334|Homo sapiens MUC15 protein protein. 35 0.31
AJ507429-1|CAD45555.1| 284|Homo sapiens MUC15/S protein protein. 32 2.9
BC041087-1|AAH41087.1| 519|Homo sapiens ZFP30 protein protein. 31 5.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 5.1
AB023178-1|BAA76805.2| 530|Homo sapiens KIAA0961 protein protein. 31 5.1
M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein. 30 8.8
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein. 30 8.8
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein. 30 8.8
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein. 30 8.8
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 30 8.8
>BC058007-1|AAH58007.1| 334|Homo sapiens mucin 15, cell surface
associated protein.
Length = 334
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 135 PPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHPHSQN 183
P + +D+F FI YQ++ +++ PT F N+ +L+ N P +N
Sbjct: 187 PSGWLTTNSDSFTGFIPYQEKTTLQ--PTLKFTNNSKLFPNTSDPQKEN 233
>BC020912-1|AAH20912.2| 336|Homo sapiens mucin 15, cell surface
associated protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 135 PPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHPHSQN 183
P + +D+F FI YQ++ +++ PT F N+ +L+ N P +N
Sbjct: 187 PSGWLTTNSDSFTGFIPYQEKTTLQ--PTLKFTNNSKLFPNTSDPQKEN 233
>AJ417818-1|CAD10624.1| 334|Homo sapiens MUC15 protein protein.
Length = 334
Score = 35.1 bits (77), Expect = 0.31
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 135 PPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHPHSQN 183
P + +D+F FI YQ++ +++ PT F N+ +L+ N P +N
Sbjct: 187 PSGWLTTNSDSFTGFIPYQEKTTLQ--PTLKFTNNSKLFPNTSDPQKEN 233
>AJ507429-1|CAD45555.1| 284|Homo sapiens MUC15/S protein protein.
Length = 284
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 135 PPAYRMVLNDTFIKFINYQDRVSIELGPTPDFANDKRLYGNNDHP 179
P + +D+F FI YQ++ +++ PT F N+ +L+ N P
Sbjct: 187 PSGWLTTNSDSFTGFIPYQEKTTLQ--PTLKFTNNSKLFPNTSDP 229
>BC041087-1|AAH41087.1| 519|Homo sapiens ZFP30 protein protein.
Length = 519
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 54 VEVSEPQLTSTNQMVQNLYDAIVYENYDEAVSQALNCMRYDRPDVIKL 101
V+ S+ + N +NLY ++ ENY VS A C +PDVI L
Sbjct: 13 VDFSQEEWECLNSYQRNLYRDVILENYSNLVSLA-GC-SISKPDVITL 58
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 11 TCMLAAAANAVPGADESTTTPSVDSS-INELPESLTTASAVNSTVEV-SEPQLTSTNQ 66
T + ++ ++PG D ST +P + + I LP SL + N T+ + P L ST+Q
Sbjct: 6693 TEVASSRRTSIPGPDHSTESPDISTEVIPSLPISLGITESSNMTIITRTGPPLGSTSQ 6750
>AB023178-1|BAA76805.2| 530|Homo sapiens KIAA0961 protein protein.
Length = 530
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 54 VEVSEPQLTSTNQMVQNLYDAIVYENYDEAVSQALNCMRYDRPDVIKL 101
V+ S+ + N +NLY ++ ENY VS A C +PDVI L
Sbjct: 24 VDFSQEEWECLNSYQRNLYRDVILENYSNLVSLA-GC-SISKPDVITL 69
>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 19 NAVPGADESTTTPSVDSSINELPESLTTASAVNSTVEVSEPQLTSTNQMVQNLYDAI 75
N +P D + S S LP + N TV + PQ TS++ V++ Y I
Sbjct: 645 NTIPDDDNQVVSLSPGSRYVVLPRPVCFEKGTNYTVRLELPQYTSSDSDVESPYTLI 701
>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 19 NAVPGADESTTTPSVDSSINELPESLTTASAVNSTVEVSEPQLTSTNQMVQNLYDAI 75
N +P D + S S LP + N TV + PQ TS++ V++ Y I
Sbjct: 645 NTIPDDDNQVVSLSPGSRYVVLPRPVCFEKGTNYTVRLELPQYTSSDSDVESPYTLI 701
>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
Length = 1786
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 19 NAVPGADESTTTPSVDSSINELPESLTTASAVNSTVEVSEPQLTSTNQMVQNLYDAI 75
N +P D + S S LP + N TV + PQ TS++ V++ Y I
Sbjct: 645 NTIPDDDNQVVSLSPGSRYVVLPRPVCFEKGTNYTVRLELPQYTSSDSDVESPYTLI 701
>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
Length = 1786
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 19 NAVPGADESTTTPSVDSSINELPESLTTASAVNSTVEVSEPQLTSTNQMVQNLYDAI 75
N +P D + S S LP + N TV + PQ TS++ V++ Y I
Sbjct: 645 NTIPDDDNQVVSLSPGSRYVVLPRPVCFEKGTNYTVRLELPQYTSSDSDVESPYTLI 701
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 26 ESTTTPSVDSSINELPESLTTASAVNSTVEVSEPQLTS 63
+S TT V +S P++ TT++ ST+ S P TS
Sbjct: 1062 KSRTTTLVTTSTTSTPQTSTTSAPTTSTIPASTPSTTS 1099
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,124,093
Number of Sequences: 224733
Number of extensions: 1824426
Number of successful extensions: 4140
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 4099
Number of HSP's gapped (non-prelim): 52
length of query: 306
length of database: 73,234,838
effective HSP length: 90
effective length of query: 216
effective length of database: 53,008,868
effective search space: 11449915488
effective search space used: 11449915488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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