GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004473-TA|BGIBMGA004473-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (293 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   1.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    24   1.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.6  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 57  LSDSAAKSIEDALYNEVVSRDFNKAVYRTAILYGDGRDSIITNVVNRLIDN 107
           LSDS    I +  Y   VSR+ N   +       +G +++    +N  + N
Sbjct: 440 LSDSTMNKINNHEYKRSVSRESNSNQFILMTTVNEGNNNMAATYMNECLLN 490


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)

Query: 99  NVVNRLIDNGKSQIFD 114
           NVV +LIDN K +I+D
Sbjct: 560 NVVYKLIDNIKKEIYD 575


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 35  SSTDSPSTEATVSIENINSTLALSDSAAKSIEDALY 70
           S + SP +    +  NI+ T+ LSD    S + +L+
Sbjct: 80  SKSRSPDSRDRSNTSNISKTVILSDKLESSDDISLF 115


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 22  VDDTGSSTVAATISSTDSPSTEATVSIENINSTLALSDSAAKSIEDALYNEVVSR 76
           ++  GS  +    SST  P+T  T +     +T   + +A  +    +  E + R
Sbjct: 86  LEQIGSRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQR 140



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 16  ASANVIVDDTGSSTVAATISSTDS-PSTEATVSIENINSTLALS 58
           AS    V  TG++T     S+T + P+T + V +   N+T A++
Sbjct: 213 ASTPATVTTTGATTTLPAASATGTGPATPSAV-VATSNATAAMT 255


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 27  SSTVAATISSTDSPSTEATVSIENINSTLALSDSAAKSIED 67
           + T+  T+SS          ++   N T   S  + +S+ED
Sbjct: 120 NETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVED 160


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 27  SSTVAATISSTDSPSTEATVSIENINSTLALSDSAAKSIED 67
           + T+  T+SS          ++   N T   S  + +S+ED
Sbjct: 168 NETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVED 208


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 27  SSTVAATISSTDSPSTEATVSIENINSTLALSDSAAKSIED 67
           + T+  T+SS          ++   N T   S  + +S+ED
Sbjct: 168 NETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVED 208


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 27  SSTVAATISSTDSPSTEATVSIENINSTLALSDSAAKSIED 67
           + T+  T+SS          ++   N T   S  + +S+ED
Sbjct: 168 NETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVED 208


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,956
Number of Sequences: 429
Number of extensions: 3453
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 9
length of query: 293
length of database: 140,377
effective HSP length: 57
effective length of query: 236
effective length of database: 115,924
effective search space: 27358064
effective search space used: 27358064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)