GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004465-TA|BGIBMGA004465-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein, IPR008997|Ricin B-related lectin
         (266 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 43  ITRNYEAAASMTVQLKRRSSGRYITIIVNRLIRENKRNLCDLAY 86
           + R Y+ A       +R +SGRY +      +R ++ + C+  Y
Sbjct: 413 VRRRYQPAFRCKPS-QRFASGRYYSAYSLHHVRSSRESSCEQTY 455


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 32   SGYEDIVTNAIITRNYEAAASMTVQLKRRSSGR 64
            S   D  TNA++T++ EA  ++T   +  +  R
Sbjct: 995  SANNDKDTNAVVTQSKEARDNITATKQLNNKAR 1027


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,564
Number of Sequences: 429
Number of extensions: 3224
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 266
length of database: 140,377
effective HSP length: 57
effective length of query: 209
effective length of database: 115,924
effective search space: 24228116
effective search space used: 24228116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)