GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004461-TA|BGIBMGA004461-PA|undefined
         (113 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    20   6.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    20   6.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    20   6.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    20   6.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    20   6.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    20   6.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   6.2  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    20   8.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    20   8.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    20   8.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    20   8.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    20   8.2  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G+WIS+++Q
Sbjct: 124 PPRPMGSWISIQEQ 137


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
          protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)

Query: 61 EPIRWNGTWISV 72
          E + W+G WI V
Sbjct: 56 ERVEWSGPWILV 67


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G WISV++Q
Sbjct: 131 PPRPMGPWISVQEQ 144


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G WIS+++Q
Sbjct: 127 PPRSMGPWISIQEQ 140


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G WIS+++Q
Sbjct: 127 PPRSMGPWISIQEQ 140


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G WIS+++Q
Sbjct: 127 PPRSMGPWISIQEQ 140


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 62  PIRWNGTWISVKDQ 75
           P R  G WIS+++Q
Sbjct: 360 PPRSMGPWISIQEQ 373


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,609
Number of Sequences: 429
Number of extensions: 989
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 113
length of database: 140,377
effective HSP length: 50
effective length of query: 63
effective length of database: 118,927
effective search space:  7492401
effective search space used:  7492401
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)