BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004460-TA|BGIBMGA004460-PA|IPR001254|Peptidase S1 and
S6, chymotrypsin/Hap, IPR009003|Peptidase, trypsin-like serine and
cysteine
(325 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 30 0.024
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 27 0.29
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 1.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 1.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 1.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 1.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 2.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 24 2.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 3.6
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 4.8
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 155 KRQKGPRHDRANKVESRRIITGKDALIEDYPYVVSIQKQREHW--CAGALLNPRLVITTA 212
KR K + RI+ G + I ++P + I++ E C +++ R V+T A
Sbjct: 143 KRVKDSTNCNCGWKNPSRIVGGTNTGINEFPMMAGIKRTYEPGMICGATIISKRYVLTAA 202
Query: 213 NCL 215
+C+
Sbjct: 203 HCI 205
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 26.6 bits (56), Expect = 0.29
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 39 NSGHFVKLQKNLNNEYTAFPVV-DPKSKMNV 68
+S VK+ LN YTAF V+ DPK NV
Sbjct: 429 DSSGAVKIVNMLNQLYTAFDVLTDPKKNPNV 459
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 104
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 285 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 337
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ ++L +Y Y + +H
Sbjct: 285 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKH 337
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPYVVSIQKQREH 196
NKRE++K ++ + N+ E R II+ + L +Y Y + +H
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKH 104
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 2.1
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 149 NKREHKKRQKGPRHDRANKVESRR-----IITGKDALIEDYPY 186
NKRE++K ++ + N+ E R II+ ++L +Y Y
Sbjct: 52 NKREYRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNY 94
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 52 NEYTAFPVVDPKSKMNVPQS 71
NE T VV K K NVPQS
Sbjct: 345 NEDTLQMVVSMKIKQNVPQS 364
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 146 SKSNKREHKKRQKGPRHD-RANKVESRRIITGK 177
++SN RE +KRQ P +D + ++ I+T +
Sbjct: 392 TQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQ 424
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,669
Number of Sequences: 429
Number of extensions: 3860
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 16
length of query: 325
length of database: 140,377
effective HSP length: 58
effective length of query: 267
effective length of database: 115,495
effective search space: 30837165
effective search space used: 30837165
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)
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