GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004437-TA|BGIBMGA004437-PA|undefined
         (92 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.20 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   0.35 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   0.47 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   1.1  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   1.1  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   1.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   1.1  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   4.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.20
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 24   ELYEPPLTTINTHLKELTEKQ-DAIHNTIKFERQKLEDIQNDAMLDAMVRAANVEKAANT 82
            ++Y+     I TH  E+T+KQ +A   +++ E +  EDI    +  A V   + E A N 
Sbjct: 1080 DVYQTLKHIIQTH-GEMTDKQVEAYMLSLRDENRYHEDIFGITLRTAEVHNRSRETARNR 1138

Query: 83   RAA 85
             AA
Sbjct: 1139 MAA 1141


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 0.35
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 9/57 (15%)

Query: 38  KELTEKQDAIHN--------TIKFERQKLEDIQNDAMLDAMVRAANVEKAANTRAAI 86
           K+L E +DAI+N        TI+ +R   +D   +A+  +++R  N++   + +AAI
Sbjct: 269 KQLIESEDAIYNIISEIIETTIQEKRDDAKDESVEAIFQSILRQKNLD-IRDKKAAI 324


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
          protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 0.47
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 11 DAKTCNLLAKGILELYEPPLTTINTHLKELTEKQDAIHNTI 51
          D   C+++ K I EL    L   N H    T +Q  I NT+
Sbjct: 42 DRGHCDVIGKKIKELLPEVL---NNHCNRCTSRQIGIANTL 79


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
          protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 2  ENTEKADLNDAKTCNLLA 19
          EN E+AD +   TC+LL+
Sbjct: 33 ENEERADRHRRVTCDLLS 50


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
          precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 2  ENTEKADLNDAKTCNLLA 19
          EN E+AD +   TC+LL+
Sbjct: 33 ENEERADRHRRVTCDLLS 50


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 2  ENTEKADLNDAKTCNLLA 19
          EN E+AD +   TC+LL+
Sbjct: 8  ENEERADRHRRVTCDLLS 25


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 7/33 (21%), Positives = 17/33 (51%)

Query: 26  YEPPLTTINTHLKELTEKQDAIHNTIKFERQKL 58
           Y+  L+ +  H+++     D +H  +KF   ++
Sbjct: 82  YDRVLSVLGRHVRDFLNGLDNLHEYLKFSYPRM 114


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic
          acetylcholine receptor alpha3subunit protein.
          Length = 566

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 25 LYEPPLTTINTHLKELTEKQDAIHNTIKFERQKLEDI 61
          LY+  L+  N  ++ +    DA+   IK +  +L D+
Sbjct: 28 LYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDV 64


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.124    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,098
Number of Sequences: 429
Number of extensions: 613
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 92
length of database: 140,377
effective HSP length: 48
effective length of query: 44
effective length of database: 119,785
effective search space:  5270540
effective search space used:  5270540
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.0 bits)
S2: 38 (19.4 bits)