GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004433-TA|BGIBMGA004433-PA|undefined
         (243 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.9  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 45  ENNNLKMEIKTLQGKIKSMEDHKRKNNIIFFGMKEEENNELPIESIIKLLEKN 97
           ENN        +QG  +  ++    NN I    K+E+N E   E I+  +E+N
Sbjct: 125 ENNTGSSLCDLVQGLERLFDEKNAGNNKITMKSKKEQNAE---EDIVDPVEEN 174


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)

Query: 36  NEKLTALVEENNNLKMEIKTLQGK-IKSMEDHKRKNNIIFFG 76
           N KL  +++ ++ L+M I  L+ K +KS+ED + + NII  G
Sbjct: 354 NSKLEKVIK-HDILRMLIIDLRKKQLKSLEDWENEMNIITKG 394


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 43  VEENNNLKMEIKTLQGKIKSMEDHKRKNNIIFFGMKEEENNELPIESIIKLLEKNMNIQI 102
           V++   L  E+K+  GK+  ++      N I   ++  E N   I+ +I     N+++ +
Sbjct: 41  VDKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTL 100

Query: 103 NPQEI 107
              E+
Sbjct: 101 QNDEV 105


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/23 (26%), Positives = 16/23 (69%)

Query: 211 PKLAPKKINKTNSMLNYMARGRS 233
           P++  +++ +T+ + NY+ RG +
Sbjct: 714 PRMTAEQLKRTDIIHNYIMRGEA 736


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.127    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,674
Number of Sequences: 429
Number of extensions: 3178
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 243
length of database: 140,377
effective HSP length: 56
effective length of query: 187
effective length of database: 116,353
effective search space: 21758011
effective search space used: 21758011
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 43 (21.4 bits)