Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004432-TA|BGIBMGA004432-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(548 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 71 2e-14
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 52 9e-09
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 48 2e-07
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 42 1e-05
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 38 3e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 37 4e-04
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 30 0.043
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 25 2.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 2.8
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 24 2.8
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 24 2.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 3.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 3.7
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 4.9
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 4.9
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 4.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 6.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 8.6
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 71.3 bits (167), Expect = 2e-14
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 368 DDPDSKKTCGEHFDTQAACLRHHLAQHPRTSFFSPTERHICEICGASLA-PGSVAMHVNL 426
+DP CG+ F A RH+ RT + + + CE C S + ++++H +
Sbjct: 89 EDPYRCNICGKTFAVPARLTRHY-----RTH--TGEKPYQCEYCSKSFSVKENLSVHRRI 141
Query: 427 HTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLCDKRFTQSNSMKLHYKTFHLK 486
HT++ + C C + F L RH+ HTGE+ C +C K F QS + +H +T +
Sbjct: 142 HTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGE 201
Query: 487 QPY 489
+PY
Sbjct: 202 KPY 204
Score = 68.5 bits (160), Expect = 1e-13
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 34/225 (15%)
Query: 273 YECLRCDLVCAQEHASTYYSHMRTH----RSAHVCVSCGASYVSRAGLQQHRKLKHVHDD 328
Y+CL C Q++ Y SH+R+H + C CG ++ A L +H + H +
Sbjct: 62 YQCLLCQKAFDQKNL--YQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRT-HTGEK 118
Query: 329 A--SDTFGRVVVIAAGLQASR-MSTDAPPLEAADGIASTLYCDDPDSKKTCGEHFDTQAA 385
+ + + L R + T P + CD C F+ +
Sbjct: 119 PYQCEYCSKSFSVKENLSVHRRIHTKERPYK----------CD------VCERAFE-HSG 161
Query: 386 CLRHHLAQHPRTSFFSPTERHICEICGAS-LAPGSVAMHVNLHTRQHVHTCGTCGKQFHM 444
L H+ H + H C +C + + G + +H+ HT + + C CGK F
Sbjct: 162 KLHRHMRIH------TGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTC 215
Query: 445 LNGLKRHLVTHTGEKKFSCPLCDKRFTQSNSMKLHYKTFHLKQPY 489
LK H THTGEK ++C +C K F ++ +KLH + ++ Y
Sbjct: 216 SKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVY 260
Score = 49.6 bits (113), Expect = 7e-08
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 217 FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHYTKYECL 276
++C C + F+ + L H E P +C +C + K +L H R H TK
Sbjct: 92 YRCNICGKTFAVPARLTRHYRTHTGEKP--YQCEYCSKSFSVKENLSVHRRIH-TKERPY 148
Query: 277 RCDLVC--AQEHASTYYSHMRTHRSA--HVCVSCGASYVSRAGLQQHRK 321
+CD VC A EH+ + HMR H H C C +++ L H +
Sbjct: 149 KCD-VCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMR 196
Score = 49.6 bits (113), Expect = 7e-08
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 217 FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHYTK--YE 274
++C C + FS K L HR +E P +C C ++ L +HMR H + ++
Sbjct: 120 YQCEYCSKSFSVKENLSVHRRIHTKERP--YKCDVCERAFEHSGKLHRHMRIHTGERPHK 177
Query: 275 CLRCDLVCAQEHASTYYSHMRTH--RSAHVCVSCGASYVSRAGLQQHRK 321
C C Q + HMRTH +VC +CG + L+ H +
Sbjct: 178 CTVCSKTFIQ--SGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTR 224
Score = 39.5 bits (88), Expect = 7e-05
Identities = 47/222 (21%), Positives = 83/222 (37%), Gaps = 22/222 (9%)
Query: 258 WKCDLRKHMRQHYTKYECLRCDLVCAQEHASTYYSHMRTHRSAHVCVSCGASYVSRAGLQ 317
++ LR H ++ Y C C A T + T + C C S+ + L
Sbjct: 77 YQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLS 136
Query: 318 QHRKLK--------HVHDDASDTFGRV---VVIAAGLQASRMSTDAPPLEAADGIA---S 363
HR++ V + A + G++ + I G + + + + + +
Sbjct: 137 VHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMR 196
Query: 364 TLYCDDPDSKKTCGEHFDTQAACLRHHLAQHPRTSFFSPTERHICEICGASLAPGSV-AM 422
T + P K CG+ F C + L H RT + + + C+ICG S V +
Sbjct: 197 THTGEKPYVCKACGKGF----TCSK-QLKVHTRT--HTGEKPYTCDICGKSFGYNHVLKL 249
Query: 423 HVNLHTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFSCP 464
H H + V+ C C + F ++ H+ TH+ P
Sbjct: 250 HQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSP 291
Score = 39.1 bits (87), Expect = 9e-05
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 430 QHVHTCGTCGKQFHMLNGLKRHLVTH--TGEKKFSCPLCDKRFTQSNSMKLHYKTFHLKQ 487
+ + C C K F N + HL +H GE + C +C K F + HY+T ++
Sbjct: 59 EKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEK 118
Query: 488 PY 489
PY
Sbjct: 119 PY 120
Score = 28.7 bits (61), Expect = 0.13
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 453 VTHTGEKKFSCPLCDKRFTQSNSMKLHYKT 482
+T+ EK + C LC K F Q N + H ++
Sbjct: 54 LTNIEEKTYQCLLCQKAFDQKNLYQSHLRS 83
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 52.4 bits (120), Expect = 9e-09
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 427 HTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLCDKRFTQSNSMKLHYKTFHLK 486
HT + C C K+F + LK H+ HTGEK + C CD++F Q +++ H + +
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGE 63
Query: 487 QPY 489
+PY
Sbjct: 64 RPY 66
Score = 51.2 bits (117), Expect = 2e-08
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 423 HVNLHTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLC 466
H+ LHT + + C C +QF + L+RHL HTGE+ ++C LC
Sbjct: 28 HMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
Score = 46.4 bits (105), Expect = 6e-07
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 454 THTGEKKFSCPLCDKRFTQSNSMKLHYKTFHLKQPY 489
THTGEK F CP C KRFT+ + +K H + ++PY
Sbjct: 3 THTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPY 38
Score = 34.7 bits (76), Expect = 0.002
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 217 FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHYTKYECL 276
F+C +C + F++ L+ H E P C C ++ +LR+H+R H T
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKP--YHCSHCDRQFVQVANLRRHLRVH-TGERPY 66
Query: 277 RCDLVCAQ 284
C+L A+
Sbjct: 67 ACELCAAK 74
Score = 27.9 bits (59), Expect = 0.23
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 273 YECLRCDLVCAQEHASTYYSHMRTHRSAHVCVSCGASYVSRAGLQQHRKL 322
+EC C ++H + + T + C C +V A L++H ++
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 59
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 48.4 bits (110), Expect = 2e-07
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 408 CEICGASLAPGSVAMHVNLHTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLCD 467
CE SL G++ MH+ HT C CGK F L+ H+ THTGEK FSC C+
Sbjct: 22 CEKVYVSL--GALKMHIRTHTLPC--KCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCN 77
Query: 468 KRF 470
+ F
Sbjct: 78 RAF 80
Score = 35.5 bits (78), Expect = 0.001
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 434 TCGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLCDKRFTQSNSMKLHYKTFHLKQPY 489
+C C K + L LK H+ THT K C LC K F++ ++ H +T ++P+
Sbjct: 18 SCKYCEKVYVSLGALKMHIRTHTLPCK--CHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Score = 29.1 bits (62), Expect = 0.099
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 458 EKKFSCPLCDKRFTQSNSMKLHYKTFHL 485
+K FSC C+K + ++K+H +T L
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHTL 41
Score = 25.4 bits (53), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 218 KCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFC 252
KC C + FS+ +L+GH E P C+ C
Sbjct: 44 KCHLCGKAFSRPWLLQGHIRTHTGEKP--FSCQHC 76
Score = 25.0 bits (52), Expect = 1.6
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 249 CRFCRIRYKWKCDLRKHMRQHYTKYECLRCDLVCAQEHASTYYSHMRTH--RSAHVCVSC 306
C++C Y L+ H+R H +C C A H+RTH C C
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHTLPCKCHLCGK--AFSRPWLLQGHIRTHTGEKPFSCQHC 76
Query: 307 GASY 310
++
Sbjct: 77 NRAF 80
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 41.9 bits (94), Expect = 1e-05
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 434 TCGTCGKQFHMLNGLKRHLVTHTGEKK--FSCPLCDKRFTQSNSMKLHYKTFHLKQP 488
TC CGK LKRH+ E++ + C +C++ + NS+ H T+H +P
Sbjct: 7 TCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRP 63
Score = 29.5 bits (63), Expect = 0.075
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 204 RKRADDMKYLQAEFKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRF 251
R AD Q E++C C R + ++ L H H+ PG ++ +F
Sbjct: 23 RHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRPGDIDIKF 70
Score = 24.6 bits (51), Expect = 2.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 456 TGEKKFSCPLCDKRFTQSNSMKLHYKTFHLKQ 487
+ +K F+C LC K S+K H H ++
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAER 32
Score = 24.6 bits (51), Expect = 2.1
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 217 FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHY 270
F C C + K+ L+ H +H E C C Y + L H+ ++
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 37.5 bits (83), Expect = 3e-04
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 422 MHVNLHTRQHVHTCGTCGKQFHMLNGLKRHLVTHTGEKKFS--CPLCDKRFTQSNSMKLH 479
+H NL +TC CGK LKRH + S C LC K F NS+ H
Sbjct: 361 LHGNLLPPGVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNH 420
Query: 480 YKTFHLKQ 487
+H +Q
Sbjct: 421 KSIYHRRQ 428
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 37.1 bits (82), Expect = 4e-04
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 218 KCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKH 265
+C C R FS L+ H +H+++ L C FC RY+ K L H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
Score = 30.7 bits (66), Expect = 0.032
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 435 CGTCGKQFHMLNGLKRHLVT--HTGEKKFSCPLCDKRFTQSNSMKLHYKTFH 484
C C + F LKRH + + C C++R+ NS+ H H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 25.4 bits (53), Expect = 1.2
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 205 KRADDMKYLQAE--FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLE 248
KR K+ Q++ + C C R + K+ L H++ +H+ + G+L+
Sbjct: 22 KRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSSGMLK 67
Score = 24.2 bits (50), Expect = 2.8
Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 248 ECRFCRIRYKWKCDLRKHMRQHYTKYECLRCDLVCAQEHASTYYSHMRTHRS 299
EC +CR + L++H + + + + L C + + + + + TH+S
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTK--NSLTTHKS 56
Score = 24.2 bits (50), Expect = 2.8
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 288 STYYSHMRTHRSAH-------VCVSCGASYVSRAGLQQHRKLKH 324
S YYS R + H VC C Y ++ L H+ L+H
Sbjct: 16 SCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 30.3 bits (65), Expect = 0.043
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 423 HVNLHTRQHVHT----CGTCGKQFHMLNGLKRHLVTHTGEKKFSCPLCDKRFTQSNSMKL 478
H+ H R H + C C + L HL +H+ ++ C C +S+KL
Sbjct: 3 HLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKL 62
Query: 479 HYKTF 483
H + +
Sbjct: 63 HLRKY 67
Score = 27.1 bits (57), Expect = 0.40
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 217 FKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQH 269
FKC C KSML H + H C C K+ L+ H+R++
Sbjct: 17 FKCEKCSYSCVNKSMLNSH-LKSHSNV-YQYRCANCTYATKYCHSLKLHLRKY 67
Score = 22.6 bits (46), Expect = 8.6
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 229 KSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHYTKYECLRCDLVCAQEHAS 288
K LE H P +C C K L H++ H Y+ + A ++
Sbjct: 1 KHHLEYHLRNHFGSKP--FKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCH 58
Query: 289 TYYSHMRTH 297
+ H+R +
Sbjct: 59 SLKLHLRKY 67
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 24.6 bits (51), Expect = 2.1
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 216 EFKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWKCDLRKHMRQHYTKY 273
EF+C C + + + L H H C C+ Y LR H ++ ++
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQH 59
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 2.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 259 KCDLRKHMRQHYTKYECLRCDLVCAQEHA 287
KC L + + Y CL+ DL+ ++ A
Sbjct: 273 KCSLCQRRFEEQGNYSCLKVDLIFTRDRA 301
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 24.2 bits (50), Expect = 2.8
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 200 LKEFRKRADDMKYLQAEFKCTDCFRGFSKKSMLEGHRTRRHQETPGLLECRFCRIRYKWK 259
++EFR D +Y C D +M E R+ + P EC FCR + +
Sbjct: 1 MEEFRHNGRDFEY------CPD----LDNVTMPETTPRRKKNKKPLPTECVFCRNNGEEE 50
Query: 260 CDLRKHM 266
RKH+
Sbjct: 51 AYYRKHL 57
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 24.2 bits (50), Expect = 2.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 183 VVDLGNWRKYDLTEAEALKEFRKRADDMKYLQAE 216
+ D+ N R+ LTE +A+KE ++ L+ E
Sbjct: 321 IYDISNKRRLGLTEYQAVKEMHDGIAELIKLEKE 354
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 3.7
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 157 KEEKVNSK-SDETDVE--NDDNQKIKNRTVVDLGNWRKYDLTEAEALKEFRKRADDMKYL 213
+E+ +N K SD D + + +N + K+ T D+ ++ + E LKE R +D+K++
Sbjct: 165 EEQTINRKNSDYLDNQEVSMENTENKSCTDSDIEKYKMFCNLENVKLKELRIILEDIKHI 224
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 3.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 181 RTVVDLGNWRKYDLTEAEALKEFRKRADDMKYLQAEFKCTDCFRGFSKKSMLEGHRTRRH 240
RT++D RK D+TE + K + A M L E + GF K + R+
Sbjct: 451 RTLLDESIQRKSDITELDVSKRCKDLASFMGNLLQETRTP----GFGKDVLATDERSFSG 506
Query: 241 QETPGLLE 248
P L E
Sbjct: 507 SRNPLLQE 514
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.4 bits (48), Expect = 4.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 192 YDLTEAEALKEFRKRADDM 210
+DLT + L+++R RA+D+
Sbjct: 166 FDLTSDKLLRQYRLRAEDI 184
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 4.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 31 FCYECVMILYKFHKFKEKCYNGQKVLRE 58
+C ++I+Y + + N +K LRE
Sbjct: 220 YCIPMILIIYYYSQIVSHVVNHEKALRE 247
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 23.4 bits (48), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 181 RTVVDLGNWRKYDLTEAEALKEFRKRADDMKYLQAE 216
RT++D RK D+TE + K + A M+ L E
Sbjct: 157 RTLLDESIQRKSDITELDVSKRCKDLASFMENLLQE 192
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 6.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 441 QFHMLNGLKRHLVTHTGEKKFSCPLCDKRFTQS 473
QF +L +RH H +S C+ +F +S
Sbjct: 187 QFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRS 219
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 8.6
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 258 WKCDLRKHMRQHYTKYECLRC 278
W CD + Y +Y C+ C
Sbjct: 558 WVCDQCEEYEYVYDEYTCMDC 578
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.134 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,998
Number of Sequences: 429
Number of extensions: 7362
Number of successful extensions: 70
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 49
length of query: 548
length of database: 140,377
effective HSP length: 61
effective length of query: 487
effective length of database: 114,208
effective search space: 55619296
effective search space used: 55619296
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)
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