GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004407-TA|BGIBMGA004407-PA|IPR002048|Calcium-binding
EF-hand
         (473 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    27   0.45 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   2.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   2.4  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   3.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   5.5  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 26.6 bits (56), Expect = 0.45
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 15/83 (18%)

Query: 49  DDTGTSITKQE-SETIEVETFKELYQPKLDNDESYKSIPKFYYKLPRNDDVLAQ--KLRE 105
           +D+G  I K + SE +++  +KEL  P +  DE  +           ND +L +  K R+
Sbjct: 366 NDSGNPILKAKPSEVVQILGWKEL--PNV-GDEILEV---------ENDKILQEVIKFRQ 413

Query: 106 ETRAQFLQKKSKELLDNAELKHL 128
           + RA+ L K+ K   D    KHL
Sbjct: 414 KQRAEILAKEHKAAADQKLEKHL 436


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 397 FKAIQKQMIAHGAEPVNFDDVKDEIF 422
           F+ I+KQ+++     V FDD  D IF
Sbjct: 332 FEFIRKQVLSGSTGKVAFDDNGDRIF 357


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 301 SALRVYGQYLNLDRDHNGMLSINELAGYGSGTLTQAFLQRVFQQCLTYDGEMDYKTYLDL 360
           SA+  + ++  L R +  M++ NE       TL      ++ Q  L Y G M+     + 
Sbjct: 326 SAIGCWNEHQPLQRQNMDMVAQNEK------TLQMIISVKIIQN-LAYSGRMNRIHKNEY 378

Query: 361 VLALENRKQ 369
           +LAL NR Q
Sbjct: 379 MLALSNRMQ 387


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 169 FGRLQAAEGSVGRIRAVSLFNYV-MRRVWLQQTRIGLSLYDVTGQGYLTEQDLESYIAE 226
           FG L  +  + G +    +F Y+ +  +  + T IGL L++   +    E DLE Y+ +
Sbjct: 34  FGFLDNSVWADGLLVFYEVFRYLELAMIRWKDTEIGLFLHEELRRTEAFEVDLEFYLGK 92


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 77  DNDESYKSIPKFYYK---LPRNDDVLAQKLREETRAQFLQKKSKELL 120
           + +E Y   P  YY    L R +   + K+RE    QFL+++  + L
Sbjct: 18  EKNEMYPKDPYLYYDFYPLERGELTNSGKMREYQLGQFLRERYGDFL 64


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 77  DNDESYKSIPKFYYK---LPRNDDVLAQKLREETRAQFLQKKSKELL 120
           + +E Y   P  YY    L R +   + K+RE    QFL+++  + L
Sbjct: 33  EKNEMYPKDPYLYYDFYPLERGELTNSGKMREYQLGQFLRERYGDFL 79


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 90  YKLPRNDDVLAQKLREETRAQFLQKKSKE--LLDNAELKHLWTLLEKTNGNYSSSNNDEL 147
           YK  R      ++ +E +R +  +++S+E  ++ +   K +       N NY+++ N+  
Sbjct: 283 YKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNNYNNYN 342

Query: 148 IIDYFQFKKI 157
             +Y  +KK+
Sbjct: 343 NNNYNNYKKL 352


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,827
Number of Sequences: 429
Number of extensions: 4969
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 473
length of database: 140,377
effective HSP length: 60
effective length of query: 413
effective length of database: 114,637
effective search space: 47345081
effective search space used: 47345081
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)