GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004405-TA|BGIBMGA004405-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (254 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   3.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   6.2  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.2  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.2  

>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 9/59 (15%)

Query: 40  EAIATAQELISNNKSTVVRDAVKLLMHNKVRNSMEFAYKLWQS-GNSEIVRKQFPVAFE 97
           +A+AT  +  ++ +  V++  +K L+ NK         +LW S  N     K+F V FE
Sbjct: 70  DALATDCKKCTDKQREVIKKVIKFLVENKP--------ELWDSLANKYDPDKKFRVKFE 120


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 1   MLSTECLIFLLCAASASISQTDWDLEDKIYVEVSSASY 38
           MLS   + F +C A   + +  +  ED  Y +++   Y
Sbjct: 261 MLSAVVITFFICWAPFHVQRLLYVYEDSTYDDINQWVY 298


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 40 EAIATAQELISNNKSTVVRDAVKLLMHNK 68
          +A+AT  +  ++ +  V++  +K L+ NK
Sbjct: 70 DALATDCKKCTDKQREVIKKVIKFLVENK 98


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 215 YRQALKLSRQTGLDGGYNVFGHNGDAIN 242
           Y   +KL  + GL+   N+   NGD++N
Sbjct: 346 YGNHVKLYTKQGLNVLGNIVQGNGDSVN 373


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 40 EAIATAQELISNNKSTVVRDAVKLLMHNK 68
          +A+AT  +  ++ +  V++  +K L+ NK
Sbjct: 70 DALATDCKKCTDKQREVIKKVIKFLVENK 98


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,413
Number of Sequences: 429
Number of extensions: 3379
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 254
length of database: 140,377
effective HSP length: 56
effective length of query: 198
effective length of database: 116,353
effective search space: 23037894
effective search space used: 23037894
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)