GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004403-TA|BGIBMGA004403-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (263 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.5  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 45  NYDSAVAQSLEHEKQNRGSIIQNVVDDLIIDKRRNTMEYC 84
           N D+     LE E  N   +     ++ I+D+ RN +  C
Sbjct: 69  NQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFEC 108


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/30 (26%), Positives = 17/30 (56%)

Query: 226 DALELGAIVNASGDRKAVGHDGEVDGLPDI 255
           +A+  G+++N  G+R  +     +D L +I
Sbjct: 319 EAIHTGSVINTRGERIQLTEKNGIDVLGNI 348


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,274
Number of Sequences: 429
Number of extensions: 4325
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 2
length of query: 263
length of database: 140,377
effective HSP length: 57
effective length of query: 206
effective length of database: 115,924
effective search space: 23880344
effective search space used: 23880344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)