GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004401-TA|BGIBMGA004401-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (308 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 212 KIVNTQRNQYLTLSVKTTPTQNHMAYGVNSV 242
           KIVN     Y    V T P +N   Y V +V
Sbjct: 435 KIVNMLNQLYTAFDVLTDPKKNPNVYKVETV 465


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 212 KIVNTQRNQYLTLSVKTTPTQNHMAYGVNSV 242
           KIVN     Y    V T P +N   Y V +V
Sbjct: 435 KIVNMLNQLYTAFDVLTDPKKNPNVYKVETV 465


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,552
Number of Sequences: 429
Number of extensions: 4498
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 308
length of database: 140,377
effective HSP length: 58
effective length of query: 250
effective length of database: 115,495
effective search space: 28873750
effective search space used: 28873750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)