GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004398-TA|BGIBMGA004398-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein, IPR008997|Ricin B-related lectin
         (244 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   5.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 99  IKITDAKYGYSIKLTPGQNKAIIN----ISDNTNVRSSWVFKPLWESNKLYFKIWNADSN 154
           +++ D +Y   +  T G  +A+ N     ++  N+RS+    P     K  +++WN    
Sbjct: 135 LQVFDCRY---VTTTSGMFEALCNHIKYSTNKGNIRSAITIFPQRTDGKHDYRVWNHQLI 191

Query: 155 SYLEFGEKD 163
           SY  +   D
Sbjct: 192 SYAGYKNPD 200


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 119 AIINISDNTNVRSSWVFKPLWESNKLYFKIW 149
           A++  S    V   W+F  LW S  L   +W
Sbjct: 117 AVLPFSATWEVFKVWIFGDLWCSIWLAVDVW 147


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 215 ENSNDEQQLFGELTRTDVNFEHY 237
           E  NDE+ LF       +NF+ Y
Sbjct: 157 ELPNDEKSLFENGVEIGINFDKY 179


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase
          domain protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 46 NNVSELQETISKLISDKIRNLVDFSYRLWTTGSREIITDNF 86
          N+V EL+    +  +   + ++D S + W     E++ D +
Sbjct: 12 NSVKELRNLAQQAFAHSNQLIIDKSLKGWKEVEYEVVRDAY 52


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/42 (21%), Positives = 19/42 (45%)

Query: 182 QWYLVPDKNAATSEIFFYIYNRKFNDPIEINLKENSNDEQQL 223
           Q ++ P +N      F+   N   +   ++  K+N  +EQ +
Sbjct: 128 QKFIFPQENNYNDNYFYSKSNGSNSSNSDVLFKQNKEEEQTI 169


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 199 YIYNRKFNDPIEINLKENSNDEQQLFGE 226
           YIYN  F+D  E  + + + +  Q+  +
Sbjct: 323 YIYNNPFSDVEERRVSKTAMNSNQIVSD 350


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,655
Number of Sequences: 429
Number of extensions: 3326
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 244
length of database: 140,377
effective HSP length: 56
effective length of query: 188
effective length of database: 116,353
effective search space: 21874364
effective search space used: 21874364
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)