Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA004392-TA|BGIBMGA004392-PA|undefined
(327 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 25 0.90
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 2.1
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 3.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 3.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 3.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 3.6
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 4.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 6.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 8.4
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 189 DPEIDKDDNSLIDVEEVKPNDSPLLHKEENTKESEGENTSASETPSASEKTEKKKYNPL 247
D + D+ DN I ++ PN S + N+ + ++ A + +K K NPL
Sbjct: 87 DKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPL 145
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 280 FARQWRPDGAMYYGGEDVEYGAPITTNYL 308
+ R WRPD +Y + A I TN +
Sbjct: 84 YNRVWRPDTILYNNADPQYSSAVINTNVI 112
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.8 bits (49), Expect = 2.1
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 148 VEEEPTYIELTTKKVDFDQNQPYSRSSPVEPAIEQDEPI-RTDPEIDK 194
VE EP Y LT K+++ + + ++ S + P I + I PE K
Sbjct: 206 VETEPIYYNLTMVKLNWPKKR-VTKMSSINPCIFDNATIVNNGPEAAK 252
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 108 DYSRNWESEIDAAHSNYYEPKFEYTELQPVKKVESPK 144
DY N+ S+ID H + Y + V S K
Sbjct: 60 DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKK 96
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 266 FTGATLEYPVSFGRFARQWRPDGAMYYG 293
F G +S AR W+PD Y G
Sbjct: 68 FQGGKETLALSISMLARIWKPDTYFYNG 95
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 108 DYSRNWESEIDAAHSNYYEPKFEYTELQPVKKVESPK 144
DY N+ S+ID H + Y + V S K
Sbjct: 60 DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKK 96
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 108 DYSRNWESEIDAAHSNYYEPKFEYTELQPVKKVESPK 144
DY N+ S+ID H + Y + V S K
Sbjct: 60 DYKNNYPSDIDQWHDKIFVTMLRYNGVPSSLNVISKK 96
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 207 PNDSPLLHKEENTKESEGENTSASE 231
P+D + K TK+S+G T+ +E
Sbjct: 31 PDDMRTVTKRPKTKKSQGSRTTHNE 55
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.8
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 158 TTKKVDFDQNQPYSRSSPVEP-AIEQDEPIRTDPEIDKDDN-SLIDVEEVKPNDSPLLHK 215
+T +D P +S P++ + Q + P K S+I E+K + +
Sbjct: 244 STLDIDHKMLTPI-KSEPIDAYEMHQISKKKLSPATPKGSKCSMITTPEIKKEVEDMEYD 302
Query: 216 EENTKESEGENTS-ASETPSASEKTEKKKYNPLDVANL 252
+ T+ S G N ET E +K + +D+ L
Sbjct: 303 DIKTELSTGMNDDIPPETEEEEENDKKLDLDSIDMMQL 340
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 6.4
Identities = 5/20 (25%), Positives = 14/20 (70%)
Query: 176 VEPAIEQDEPIRTDPEIDKD 195
+EP ++Q +P+ + +++ D
Sbjct: 251 IEPTVQQHQPVTVNRQLNSD 270
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/28 (35%), Positives = 11/28 (39%)
Query: 266 FTGATLEYPVSFGRFARQWRPDGAMYYG 293
F G +S R WRPD Y G
Sbjct: 100 FLGPIKSLSLSIKMLERIWRPDTYFYNG 127
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.130 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,697
Number of Sequences: 429
Number of extensions: 4341
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 11
length of query: 327
length of database: 140,377
effective HSP length: 58
effective length of query: 269
effective length of database: 115,495
effective search space: 31068155
effective search space used: 31068155
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)
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