GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004386-TA|BGIBMGA004386-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (400 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.65 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.65 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.0  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 224 YKVSNVGARYIARSCFPAAIRIHESLVFAKVINKRD 259
           YKV  VG +Y+A S  P   R H   +    ++  D
Sbjct: 460 YKVETVGDKYMAVSGLPEPCRCHARCIARLALDMMD 495


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 224 YKVSNVGARYIARSCFPAAIRIHESLVFAKVINKRD 259
           YKV  VG +Y+A S  P   R H   +    ++  D
Sbjct: 460 YKVETVGDKYMAVSGLPEPCRCHARCIARLALDMMD 495


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 300  DRLCFKMRPV 309
            D++CF MRPV
Sbjct: 1699 DKICFTMRPV 1708


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,597
Number of Sequences: 429
Number of extensions: 3511
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 400
length of database: 140,377
effective HSP length: 59
effective length of query: 341
effective length of database: 115,066
effective search space: 39237506
effective search space used: 39237506
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)