GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004385-TA|BGIBMGA004385-PA|IPR004943|Lepidopteran low
molecular weight lipoprotein
         (293 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    25   1.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   3.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   3.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   3.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   5.6  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   5.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.6  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.8  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 122 SSGKFIVRELFPSAVRLYEDMVFVKIVSYK 151
           S+G +I     P+ ++++ D VF+ I  +K
Sbjct: 42  SNGDYIEENNMPNGMQIWNDKVFITIPRWK 71


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 123 SGKFIVRELFPSAVRLYEDMVFVKIVSY 150
           SG++  +  +PS +  + D +FV ++ Y
Sbjct: 56  SGEYDYKNNYPSDIDQWHDKIFVTMLRY 83


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 123 SGKFIVRELFPSAVRLYEDMVFVKIVSY 150
           SG++  +  +PS +  + D +FV ++ Y
Sbjct: 56  SGEYDYKNNYPSDIDQWHDKIFVTMLRY 83


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 123 SGKFIVRELFPSAVRLYEDMVFVKIVSY 150
           SG++  +  +PS +  + D +FV ++ Y
Sbjct: 56  SGEYDYKNNYPSDIDQWHDKIFVTMLRY 83


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 124 GKFIVRELFPSAVRLYEDMVFVKIVSYK 151
           G FI     P  + ++ D VF+ +  +K
Sbjct: 180 GDFITENNLPLGLEVWRDKVFITLPKWK 207


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 87  ILYGAGRDYMITNVVNRLIDNGQSQLIDFAY 117
           +LY  G+ +M+    NRLI+   S +++ AY
Sbjct: 163 LLYSLGQVFMLCIFGNRLIEE-SSSVMEAAY 192


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 13/51 (25%), Positives = 20/51 (39%)

Query: 26  GSSTVAASISSTDSPSTEATVSIENINSTLALSDTAAKNIEDALYNEVVTR 76
           GS  +    SST  P+T  T +     +T   + TA       +  E + R
Sbjct: 90  GSRPLHPPASSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETLQR 140


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 2   GLKKIAVILMCALAVNANVIVDDNGSSTVAASISSTDSPSTEATVSIENIN 52
           GLK   ++ +  LAV++  I +  GS T+     +         + I+N N
Sbjct: 58  GLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNLEIKNYN 108


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,113
Number of Sequences: 429
Number of extensions: 3500
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 8
length of query: 293
length of database: 140,377
effective HSP length: 57
effective length of query: 236
effective length of database: 115,924
effective search space: 27358064
effective search space used: 27358064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)