GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA004378-TA|BGIBMGA004378-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
         (345 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   5.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   5.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   9.0  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 88  DAPFLLRFLRTKKYSIPQACSMLERYLTIRQMYPQWFQKLDPLDPKIAAVIDAGYLV 144
           D P    +  T ++    A    E   T+     ++ Q +  L  +I+  ID GY+V
Sbjct: 287 DHPIPTGYYPTMRFRNGLAFPQRETGATVPLHMQKYVQMIHDLHTRISTAIDLGYVV 343


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 63  ILREEALNQMRHFIEKHPAIKKCRQDAPFLLRFLRTKKYSIPQACSMLERYLTIRQMYPQ 122
           +  EE L  +  FI K  A+K   ++   +  +     Y+IP+     E+++ + ++   
Sbjct: 338 VTSEEGLYPVAEFIAKPEALKLLDENWDLIAPYFLDYNYTIPK-----EKHVEVARLIRN 392

Query: 123 WFQKLDPLD 131
           ++ + + +D
Sbjct: 393 YYFESNKID 401


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/69 (18%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 63  ILREEALNQMRHFIEKHPAIKKCRQDAPFLLRFLRTKKYSIPQACSMLERYLTIRQMYPQ 122
           +  EE L  +  FI K  A+K   ++   +  +     Y+IP+     E+++ + ++   
Sbjct: 338 VTSEEGLYPVAEFIAKPEALKLLDENWDLIAPYFLDYNYTIPK-----EKHVEVARLIRN 392

Query: 123 WFQKLDPLD 131
           ++ + + +D
Sbjct: 393 YYFESNKID 401


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/31 (25%), Positives = 19/31 (61%)

Query: 279  PAILPKEYGGTVPLKDMIEELKRNLLKQREE 309
            P ILP++Y  T  ++ + E+ +   + Q+++
Sbjct: 1182 PTILPEQYFATSRIRGLQEQQRNAAMVQQQQ 1212


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 164 FDPHLYDSCVMARVHSMIVEHLLDEPRS 191
           FDP  +D   MA  H M      D PR+
Sbjct: 416 FDPERFDQDAMASRHPMHYLPFGDGPRN 443


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.138    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,593
Number of Sequences: 429
Number of extensions: 4744
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 345
length of database: 140,377
effective HSP length: 58
effective length of query: 287
effective length of database: 115,495
effective search space: 33147065
effective search space used: 33147065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)